Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3466 |
Symbol | |
ID | 7972577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3649627 |
End bp | 3651495 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644794050 |
Product | DNA mismatch repair protein MutL |
Protein accession | YP_002945349 |
Protein GI | 239816439 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.52693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCCC TTCCCTCTTC CATTCCGTCC CCCCAGCGCC GTCCGATCCG CGAACTTCCC GACGAGCTGA TCAGCCAGAT CGCCGCGGGC GAAGTGGTCG AACGCCCGGC CTCCGTGGTG CGTGAACTGC TCGACAACGC GCTGGACGCC GGCGCGCGCC AGGTCACGGT GCGGCTGGCT TCGGGCGGCG TGCGGCTGAT CTCGGTGGAG GACGACGGCC AGGGCATTCC GCGCGAAGAG CTCACGGTGG CACTGCGCCG CCATGCCACC AGCAAGATCG CGAGCCTGAA CGACCTCGAG ACCGTGGGTA CCATGGGCTT TCGCGGCGAG GCGCTCGCGG CCATCAACGC CATCGCGGAG CTCAGCATTC TTTCGCGCTT TGCGGGTGCC GACGGCGCCT TCGCGCTCGA CGGCCGCACC GGCGAACTGC GGCCGGTGGC CCGCGCCGTC GGCACCACGG TCGAGGTGCG CGAGCTTTTC TTCGCGACCC CCGCACGGCG CAAGTTCCTG AAGACCGACG CCACCGAGCT GGCCCACTGC ATCGAGGCCG TGCGCCGCCA TGCGCTGGCG CGGCCGGAGG TCGGCTTTTC GGTGTGGCAC GACGGCAAGC TGATGGAACA GTGGCGCGCC GCCGACCGGC GCGAGCAGCG CCTGGCCGAT GCGCTCAGCG ACGACTTCGT GGCGCAGAGC GTGGCCGTCG AGTACATGGG CGGCGCGGTG CGCGTGGCCG GGCGCGCCGG CATTCCGGAT GCGGCGCGCT CGCGCGCCGA CCAGCAGTTC TTCTACGTCA ACGGCCGCTT CGTGCGCGAC AAGGTGCTCT CGCATGCCGT GCGCAGCGCC TATGAAGACG TGCTGCACGG CCAGCGCCAG CCCGTGTACG CGCTGTACCT CGAAATCGAC CCGTCGCGCG TCGACGTGAA CGTGCATCCG ACCAAGATCG AGGTGCGCTT TCGCGATGGC CGCGAGGTGC ACCAGGCGGT GCGCCACGCG ATCGAGAACG CGCTTGCCGC ACCGCGTGCA GGCGATGCCG TTACACCGGC AGCGCCGCAG CCCTTTTTCA AGCCGAACGT GCCCGCTTCG GGTGCAACCT GGGCCCAGCC GGGCATCAAT TTCGTGGCGG CGGAGCGCGG CGCCGGCGAT TTCGAGGCCC TGTGGCCCCA GCGAACCGCC GAATCGGGCC CTTCCCTTTG GCCTGCGGCC GGTGCGGCGC CTGCGGCGTT CCGGGCCCCT GCCGGGCTGC CGGCCGAATC GCCAGGCGCA GACACCCCTG CCACCAGCGA GCATGCCTGG CCGCTGGGCC GCGCATTGGC GCAGTTGCAG GGCATCTACA TCCTGGCCGA GAACAGCCAG GGCCTGATCG TGGTCGACAT GCACGCGGCG CACGAACGCA TCGTCTACGA GCGGCTCAAG ACCCAGCTCG ACGGCGCCGC CATCACGAGC CAGCCGCTGC TGATCCCGGC CACCTTCGCG GCCACGCCCC AGGAAGTGGC CACCGCCGAG GCCTGCGCCG CGGTGCTGCC CACGCTGGGG CTGGAAATCA CGCCGTTTTC GCCGCGCACC CTTGCGGTGC GTGCGGTGCC GGGCACCCTG GCCGATGGCG ATCCGGTGGA GCTTGCGCGC AGCGTATTGG CCGAACTGGC GCAGCACGAC GCCAGCACCG TGGTGCAGCG GGCGCAGAAC GAATTGCTCT CGACCATGGC CTGCCATGGT GCGGTGCGGG CCAACCGCAG GCTCACGATC GACGAAATGA ACGCTTTATT ACGTCAAATG GAAGCCACCG AGCGTTCGGA CCAGTGCAAC CATGGCCGTC CGACCTGGCG GCAGCTGTCG ATTCGGGAGC TGGACGCGCT TTTTATGCGC GGCAGATAG
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Protein sequence | MSALPSSIPS PQRRPIRELP DELISQIAAG EVVERPASVV RELLDNALDA GARQVTVRLA SGGVRLISVE DDGQGIPREE LTVALRRHAT SKIASLNDLE TVGTMGFRGE ALAAINAIAE LSILSRFAGA DGAFALDGRT GELRPVARAV GTTVEVRELF FATPARRKFL KTDATELAHC IEAVRRHALA RPEVGFSVWH DGKLMEQWRA ADRREQRLAD ALSDDFVAQS VAVEYMGGAV RVAGRAGIPD AARSRADQQF FYVNGRFVRD KVLSHAVRSA YEDVLHGQRQ PVYALYLEID PSRVDVNVHP TKIEVRFRDG REVHQAVRHA IENALAAPRA GDAVTPAAPQ PFFKPNVPAS GATWAQPGIN FVAAERGAGD FEALWPQRTA ESGPSLWPAA GAAPAAFRAP AGLPAESPGA DTPATSEHAW PLGRALAQLQ GIYILAENSQ GLIVVDMHAA HERIVYERLK TQLDGAAITS QPLLIPATFA ATPQEVATAE ACAAVLPTLG LEITPFSPRT LAVRAVPGTL ADGDPVELAR SVLAELAQHD ASTVVQRAQN ELLSTMACHG AVRANRRLTI DEMNALLRQM EATERSDQCN HGRPTWRQLS IRELDALFMR GR
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