| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3457 |
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| Symbol | |
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| ID | 7972568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3641175 |
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| End bp | 3642131 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794041 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945340 |
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| Protein GI | 239816430 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.778802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAAA GATTCTGGGT CGCGGCGGCA TTGCTCGCTG CCGGCGGCGC ACAGGCCCAG
GCCATTCCCA AGACCATCCG CCTCATCGTG GCGTACCCCG CGGGCGGCGT CAGCGACGTG
GTCGCGCGTG CGCTCGGCGA CAGGCTCGCC GCGCAAATGG GTACCACCGT GGTGGTCGAC
AACCGCGCCG GCGCCAGCGG CGCCATCGGC ATGGATGCCG TGGCCAAGGC CGCACCCGAC
GGTGCCACGC TGGGCTTTTC GGCCATCAGC CCGCTGGTGC TGAGCCCGCA CCTCGGCAAG
CTGCCCTTCG ATCCGCTCAA GGACATTGCG CCGGTGGCGA GCGTGATGTA TTCGCCGGTG
CTGCTGATCG CCACGCCGGC CAGCAGGGCG CGCGACTTCC GCGCGCTGAT CGCCGATGCC
AAGGCGCAGC CCGGCGCGGT GCGCTGGGCC ACCTCGGGGC CGGCATCGCT CGGCCACATC
GTGCTCGAGC AGGTGAAGGC GGCCACGGGC GTCGATATCA CGCACGTGCC CTACAAGGGC
GGCGGCCAGC AGCTCAACGA TGCGCTCGGC GGGCAGTTCG AGATTCTCTC GAGCAATGCG
AGCCCCACGC TCACTTCGCA CATCCGCTCG GGCAAGCTGC GTCCGCTGGC CGTGGGTGCG
CCCGCGCGGC TCGAGAGCCT GCCGCAGGTG CCCACGCTGG GCGAGCTGGG CTTCAGTGCC
GCGAACATCA ACTCGGTGTT CGGCGTCTTC GCGCCCGCGG CCACGCCGCC CATATTGATC
GAGAAGTACA ACGCCGAGAT CAACAAGGCC CTGGCCAGCC CCGAGCTGCG CGCCAAGCTC
ACGGCCACCG ACAACGTGCC GACCGGCGGC ACCCCCGCGG CCTTCGCTGC GGAGATCGCC
TCGGAGTTCG AAGGCAATGC GCGCATCGTG AAGGCCGCGA ACATCAAGGC CGATTGA
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| Protein sequence | MQKRFWVAAA LLAAGGAQAQ AIPKTIRLIV AYPAGGVSDV VARALGDRLA AQMGTTVVVD
NRAGASGAIG MDAVAKAAPD GATLGFSAIS PLVLSPHLGK LPFDPLKDIA PVASVMYSPV
LLIATPASRA RDFRALIADA KAQPGAVRWA TSGPASLGHI VLEQVKAATG VDITHVPYKG
GGQQLNDALG GQFEILSSNA SPTLTSHIRS GKLRPLAVGA PARLESLPQV PTLGELGFSA
ANINSVFGVF APAATPPILI EKYNAEINKA LASPELRAKL TATDNVPTGG TPAAFAAEIA
SEFEGNARIV KAANIKAD
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