| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3444 |
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| Symbol | |
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| ID | 7972555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3631166 |
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| End bp | 3632023 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794028 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_002945327 |
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| Protein GI | 239816417 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCT GCGGATTCGA CATCGGGCTC GACCAGCCTT TCTTTTTGAT TGCCGGCCCC
TGCGTGGTCG AATCCGAGCA ATTGCAGATG GACACGGCCG GCACGCTGAA GGAAATCACT
TCCTCGCTCG GCATTCCGTT CATCTTCAAG AGCAGCTTCG ACAAGGCCAA CCGCTCCTCG
GGCACCAGCT TTCGCGGCCC GGGCCGCGAG AAGGGCCTGG AGATCCTGGC CAAGGTGAAG
CGCGAACTCG GCCTGCCCGT GCTGACCGAC GTCCATACCG AGGACGACAT CACCGAGGCC
GCCAAGGTGG TCGACGTGCT GCAGACGCCC GCCTTCCTGT GCCGCCAGAC CGACTTCATC
CGCGCGGTGG CGCAGTCGGG CAAGCCGGTC AACATCAAGA AGGGCCAGTT CCTTGCGCCG
CACGACATGA AGAACGTGAT CGACAAGGCG CGCGCTGCCG CCAAGGAAGC CGGCCTGCCC
GAAGACAGCT TCATGGCCTG CGAGCGCGGC GCGAGCTTCG GCTACAACAA CCTGGTGTCG
GACATGCGCT CGCTCGCGAT CATGCGCGAG ACCGGCGCGC CCGTGGTGTT CGACGCCACC
CACTCGGTGC AGCTGCCGGG CGGCCAGGGC ACGACCTCGG GCGGCCAGCG CGAAATGGTG
CCGGTGCTCT CGCGCGCGGC CGTGGCCGTG GGCGTGGCCG GCCTTTTCAT GGAAACGCAC
CCCGATCCCG CCAAGGCGCT GAGCGACGGC CCCAACGCGG TGCCGCTCAA GCACATGAAG
GCCCTGCTCG AGACGCTGCT GGCGCTCGAC CAGGTCACCA AGAAGAACGC ATTTCTAGAG
GACGTCTTTC AATCATGA
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| Protein sequence | MKLCGFDIGL DQPFFLIAGP CVVESEQLQM DTAGTLKEIT SSLGIPFIFK SSFDKANRSS
GTSFRGPGRE KGLEILAKVK RELGLPVLTD VHTEDDITEA AKVVDVLQTP AFLCRQTDFI
RAVAQSGKPV NIKKGQFLAP HDMKNVIDKA RAAAKEAGLP EDSFMACERG ASFGYNNLVS
DMRSLAIMRE TGAPVVFDAT HSVQLPGGQG TTSGGQREMV PVLSRAAVAV GVAGLFMETH
PDPAKALSDG PNAVPLKHMK ALLETLLALD QVTKKNAFLE DVFQS
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