| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3442 |
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| Symbol | |
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| ID | 7972553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3628143 |
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| End bp | 3629366 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794026 |
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| Product | phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase |
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| Protein accession | YP_002945325 |
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| Protein GI | 239816415 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
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| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATC TCGCCGGCAA ACACATCGTC CTGGGCCTTA CCGGTGGTAT CGCCTGCTAC
AAGTCGGCCG AGCTGTGCCG CCTGTTCGTG AAGGCGGGCG CCACCGTCCA GGTCGTGATG
ACCGAGGCGG CCGAGCAGTT CATCACGCCG GTCACGATGC AGGCGCTCTC GGGGCGCACG
GTCTACACCT CGCAGTGGGA CGCGCGCGAG CCCAACAACA TGCCGCACAT CAACCTGAGC
CGCGAGGCCG ACGCCATCGT GCTGGCGCCC TGCAGCGCCG ACTTCATCGC GCGGCTGGTG
CAGGGCCGGG CCGACGACCT GCTGAGCCTG ATGTGCCTCG CCCGTCCGAT GGACCGCGTG
CCGCTCCTGA TCGCGCCGGC CATGAACCGC GAGATGTGGG CGCATCCCGC CACCCAGCGC
AACCTGATGC AGGTGGCGGC CGATGGCGCC ACGGTACTGG GCGTGGGCAG CGGCTGGCAG
GCCTGCGGCG AGACGGGCGA CGGCCGCATG CTCGAGCCGG CGCAGCTGCT CGAGGACATC
ACGGCCTTCT TCGTGCCCAA GCTGCTGGCG GGCCAGAAGG TGCTGGTGAC CGCGGGCCCC
ACCTTCGAGC CGCTCGATCC GATACGCGGC ATCACCAACC ATTCGTCCGG CAAGATGGGC
TTTGCCATTG CGCGCGCGGC GCGCGAGGCC GGTGCCGAAG TCACGCTGGT GGCCGGCCCG
GTGCACCTGC CGACGCCGCG CGGAGTGAGC CGCATCGACG TGCTCAGCGC GCAGGACATG
CTCGAAGCCA CCCTCCATGC TGCGCAGTCC GCTAGCATTT TTGTAGCGAC GGCCGCGGTT
GCCGACTGGC GGCCCGCCAC CCACAGCGAG CAGAAGATCA AGAAGGACGG CAGCGGCAAG
ACGCCGGTGC TCAATTTCGT CGAGAACGCC GACATCCTGC TGGCCGTGGC CAAGAGCGAG
CGCGCGCAGG CCCGCAAGCT GTTCTGCGTG GGCTTCGCGG CCGAGAGCGA GAACCTGGCC
GAGCACGCCA AGGCCAAGCG CGAGCGCAAG GGAATTCCGC TCCTGGTCGG CAACATCGGA
CCGCTGACCT TCGGGCAGGA CGACAATGCG CTGCTGCTGG TGGATGCCAC GAGCACGCGC
GAACTGCCGC GTGCGCCCAA GCTCACCCTG GCACGCGAGC TCATGACCGA GATCGCCGCC
CGGCTGCCCG ACTGGAGAGT CTGA
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| Protein sequence | MQDLAGKHIV LGLTGGIACY KSAELCRLFV KAGATVQVVM TEAAEQFITP VTMQALSGRT
VYTSQWDARE PNNMPHINLS READAIVLAP CSADFIARLV QGRADDLLSL MCLARPMDRV
PLLIAPAMNR EMWAHPATQR NLMQVAADGA TVLGVGSGWQ ACGETGDGRM LEPAQLLEDI
TAFFVPKLLA GQKVLVTAGP TFEPLDPIRG ITNHSSGKMG FAIARAAREA GAEVTLVAGP
VHLPTPRGVS RIDVLSAQDM LEATLHAAQS ASIFVATAAV ADWRPATHSE QKIKKDGSGK
TPVLNFVENA DILLAVAKSE RAQARKLFCV GFAAESENLA EHAKAKRERK GIPLLVGNIG
PLTFGQDDNA LLLVDATSTR ELPRAPKLTL ARELMTEIAA RLPDWRV
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