Gene Vapar_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3440 
Symboldut 
ID7972551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp3627245 
End bp3627691 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content67% 
IMG OID644794024 
Productdeoxyuridine 5'-triphosphate nucleotidohydrolase 
Protein accessionYP_002945323 
Protein GI239816413 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0756] dUTPase 
TIGRFAM ID[TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGTAG ACGTTCGTAT CCTCGATCCA CGCATGGTGG ACCAATTGCC CGCCTATGCC 
ACGCCCGGCA GCGCAGGGCT CGATCTCCGG GCCTGCCTCG ATGCGCCCAT CACGCTGGAG 
CCCAACGGCT GGCAGCTCGT GGGCACCGGC ATCGCGATCC ACCTGGCCGA CCCGGCCTAT 
GCGGCGCTGA TCCTCCCGCG CTCGGGCCTC GGCCACAAGC ACGGCATCGT GCTCGGCAAT 
CTGGTGGGCC TGATCGACAG CGACTACCAG GGCGAACTCA AGATCAGCGC CTGGAACCGC 
AGCGACACGC CCTTCGTGCT CCAGCCGATG GAGCGGCTCG CCCAACTCGT GATCGTGCCG 
GTGGTGCAGG CGCAGTTTCG CGTGGTCACA GAATTTGCAG CCTCGCAACG CGGCGAAGGC 
GGCTACGGCT CCACCGGCAA GCACTGA
 
Protein sequence
MKVDVRILDP RMVDQLPAYA TPGSAGLDLR ACLDAPITLE PNGWQLVGTG IAIHLADPAY 
AALILPRSGL GHKHGIVLGN LVGLIDSDYQ GELKISAWNR SDTPFVLQPM ERLAQLVIVP 
VVQAQFRVVT EFAASQRGEG GYGSTGKH