| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3437 |
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| Symbol | |
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| ID | 7972548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3624807 |
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| End bp | 3625952 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794021 |
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| Product | Cupin 4 family protein |
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| Protein accession | YP_002945320 |
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| Protein GI | 239816410 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2850] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATTA CACAACCGCT GCCGTTGCTC GGCGGCCTGA GCGCCGCGCA GTTCATGCGG
CGGCACTGGC AGAAGAAACC GTTGCTGGTG CGCCAGGCCA TACCCGCCAT GGTGCCACCG
ATCGAGCGCA GCGCGCTCTT TGCCCTGGCC GAGCGCGAGG ACGTCGAATC GCGCCTCATC
CGCCACGGCA AGGCCGGCTG GACGCTCAGG CACGGGCCGC TCGCGCGGCG CGCGCTGCCG
CCGCGCAAGC AGCCGGCCTG GACGCTGCTG GTGCAGGGCG TCGACCTGCA TCACGACGGC
GTGCATGCGC TGCTGCAGCA GTTCCGCTTC CTGCCCGATG CGCGGCTGGA CGACCTGATG
ATCAGCTATG CGAGCGACCA GGGCGGCGTG GGCGCGCATT TCGACAGCTA CGACGTGTTC
CTGCTGCAGG CGCAGGGCAG GCGGCGCTGG TCGATCGGCC GGCAGAGCGA CCTGCGCCTG
CAGCAGGGCG TGCCGCTCAA GATCCTCGAG AACTTCGAGC CCGAGCAGAG CTTTGTGCTC
GAGCCGGGCG ACATGCTGTA CCTGCCGCCG CGCTATGCGC ACGACGGCGT GGCGGTCGGC
GACAACTGCA TGACCTGCTC CATCGGCCTG CGGTCGTCCG CGGTGGGGGA GCTTGGCGCC
GACCTGCTGG CGCGCGTGGC GCAGGCCTAT GCCGAGGCGC TCGAAGATGC GGGCCCGGCC
GAGCTCGCGC GCTACCGCGA TCCGACGCAG CCCGCGGTCG AGGCGCCGGC CGCGATGCCG
GCCGCGCTGC AGGCCTTTGC GCGCAAGGCG GTCGACGCCG CGCTGCGCGA TCCGGACGCC
ATCGACCGCG CGCTGGGCGA ATCGCTGACC GAGCCCAAGG CCAACGTCTG GTTCGACTCT
GAAGGCGCCG AGGCACCGGC GGAACTGCAC GCCGTGGCGC TCGACCGCCG CACGCGCATG
CTCTACGACG CGCGGCACCT CTACATCAAC GGCGAGAGCT TTCGGGCAGG CGGGGCCGAT
GCAACGCTGA TGCGGCGGCT GGCCGACCGG CGCGCGCTCG GGCCGCGCGA ACTGGCGCGC
GCGAGCGACG GTGCGCTCGC ACTGCTGGCC GAGTGGTGCG AAGCGGGGTG GGCCCATGCC
GAGTGA
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| Protein sequence | MEITQPLPLL GGLSAAQFMR RHWQKKPLLV RQAIPAMVPP IERSALFALA EREDVESRLI
RHGKAGWTLR HGPLARRALP PRKQPAWTLL VQGVDLHHDG VHALLQQFRF LPDARLDDLM
ISYASDQGGV GAHFDSYDVF LLQAQGRRRW SIGRQSDLRL QQGVPLKILE NFEPEQSFVL
EPGDMLYLPP RYAHDGVAVG DNCMTCSIGL RSSAVGELGA DLLARVAQAY AEALEDAGPA
ELARYRDPTQ PAVEAPAAMP AALQAFARKA VDAALRDPDA IDRALGESLT EPKANVWFDS
EGAEAPAELH AVALDRRTRM LYDARHLYIN GESFRAGGAD ATLMRRLADR RALGPRELAR
ASDGALALLA EWCEAGWAHA E
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