Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3433 |
Symbol | |
ID | 7972544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3621975 |
End bp | 3623069 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644794017 |
Product | NlpBDapX family lipoprotein |
Protein accession | YP_002945316 |
Protein GI | 239816406 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3317] Uncharacterized lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGAACC TTTCGCACAT TTCGCGAGCT GCATTGCTGG CCACCCTCGT TGTCAGCCTC GCCGCCTGCT CCGTTCTCGA GAGCGACAAG ATCGACTACA AGAGCGCCGG CAAGGCCCCG ACGCTCGAAG TCCCGCCCGA CCTGTCGCAG CTCTCGCGCG AGAACCGCTA TGCGGTGCCG GGCGGTGCGG TCACGGCCAA CGCCTACCAG GCCGGTGCCG CCAATGCGCC GGGCATTCCC ACCGCGGTGG CCAACATCGG CGACGTGCGC ATGGAGCGCT CGGGCACGCA GCGCTGGATC GTCATCAACC GCTCGCCCGA CCAGCTCTGG GATCCGGTGA AGGACTTCTG GCAGGAAAGC GGCTTCCTCC TGACCACCGA GCAGCGCAAC CTCGGCATCA TGGAAACCGA CTGGGCCGAG AACCGCGCCA AGCTGCCGCA GGACATCATC CGCGGCACGC TGGGCAAGCT GGTCGACTCG GTCTACTCGA CCGGCGAGCT CGACCGCTTC CGCACGCGCC TGGAGCGCAC GCCCACGGGC ACCGAGATCT TCATCAGCCA CCGCGGCATG CAGGAGGTCT ACAACAACAG CCGCCAGGAC CAGACCGTGT GGCAGCCGCG TCCGAGCGAT CCTGAGCTCG AGACCGAGTT CCTGCGCCGC CTGATGGTCA AGCTCGGCGT GACGCAAGAG CAGTCGAAGA TCCTGGCCGC CACCACGGCG CCCTCCAAGA CCGCGACCGT CGCCAACGTG AGCGGCCAGC CGGTCGTGCA GATCAACGAA GGTTTCGACC GCGCATGGCG CCGCGTGGGC CTGGCGCTCG ACCGCACCGG CTTCACCGTG GAGGACCGCG ACCGCAGCGC CGGCATCTAC TACGTGCGCT ACGTGACCCC GAACCCCGAC AAGAAGGAGC CCGGCTTCTT CGGCAAGCTG TTCGGCAGCT CCGAGAAGAA CGAAGCACCG ATCAAGTTCC GCATCCTCGT GAAGGGCGGC CAGGGCGAGA GCACCACGGT CTCGGTGCTG AACGCGAACG GCGCGCCCGA AACCTCGGCG AACGCGCAGC GCATCGTCCA GGTCATCGCC GACGACCTGA AGTAA
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Protein sequence | MKNLSHISRA ALLATLVVSL AACSVLESDK IDYKSAGKAP TLEVPPDLSQ LSRENRYAVP GGAVTANAYQ AGAANAPGIP TAVANIGDVR MERSGTQRWI VINRSPDQLW DPVKDFWQES GFLLTTEQRN LGIMETDWAE NRAKLPQDII RGTLGKLVDS VYSTGELDRF RTRLERTPTG TEIFISHRGM QEVYNNSRQD QTVWQPRPSD PELETEFLRR LMVKLGVTQE QSKILAATTA PSKTATVANV SGQPVVQINE GFDRAWRRVG LALDRTGFTV EDRDRSAGIY YVRYVTPNPD KKEPGFFGKL FGSSEKNEAP IKFRILVKGG QGESTTVSVL NANGAPETSA NAQRIVQVIA DDLK
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