| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3422 |
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| Symbol | |
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| ID | 7972533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3609104 |
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| End bp | 3610696 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794006 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945305 |
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| Protein GI | 239816395 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.500767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCA ACCGCTATCC CATCATCTAC GTGCGCGGCT ACGCCATGAC CGAGGCCGAG
CGCGACGACA CCGCGGCCGA TCCGTTCTGC GGATTCAACG TGGGCTCCAC CGTCTACCGC
GCCACCGTGA AGAAGGATGC GCCGGCGCAG AAGTTCGTCT TCGAATCGCC CGTGGTGCGC
CTCCTGGCCG ACTTCCAGTA CCAGAGCGTC TACCAGAACG GCCTCGATAT CCTCGACAAC
GACTGGAAGC CTTCGCCCGA CGAAACCGGC AAGGACGTGG ACGGCATTCC GGCCGCATCG
ATCGTCATCT ACCGCTACTA CGACGGCGGC TCGGAGCTGC TGGGCGACGG CAAGTCGCGC
GACGTGAAGA TCTACGCGCA GGGCTTGAGC AAGCTGATCC TTCGCGTGCG CGACCTGGTG
GCACTGCGCG AAGGAGCCGC TTTCTCGCCG GCCGACTTCC GCTGCTACCT GGTGGCGCAC
TCGATGGGCG GGCTGGTGGT GCGGGCCTTC CTGCAGAACC CGGCGCTCGG CGATGCGGCG
GCGCGCGCCT GCGTCGACAA GGTGTTCACC TACGCCACGC CGCACAACGG CATCGACATG
GGCGGCATCA ACGTGCCGGC CTGGCTCACG GCCAACGAGA TGAACACCTT CAACCGCGAG
CGGATGTCGG AGTTCATGGA CACGGCGCCG GTCGACGGCC GCATGGACTA CCTGCCGGCC
GCCGCGTTTC CGCCCGAACG CTTCTTCTGC ATGGTGGGCT CCAACCGCGG CGACTACGAG
GCCGCCAAAG GCCTCTCGCG CATGTTCGCG GGCCACGGCA GCGACGGGCT GGTGCGCATC
GAGAACGCCT CGCTCTGGTC CATCGACGAG GCCAGGCGCA GCAAGCCGGT GGCCACCGCC
TACGCCTTTC GTTCGCACTC GGGCTACTTC GGCATCGTCA ACTCCGAGGA GGCCTACCAG
AACCTCGTGC GCTTCCTGTT CGGCGACGTG CGCGTCGATC TCTGGTTCGA GGTCGATGGC
GTGACCCTGC CGCCGGACCT GCCCAAGGAC GCCGACGTCG ACGCGCTCTA CCAGGTCGAA
CTGCTGGCCG CGCCGCGCGG CAAGCGCTGG TACCTGAGCC GGCGCGTGGC CGAGGAAGAC
TCGCCCGCCT GCCGCACGCA CAAGGAACTG ACCGACCCCG AAAAGCCCGA GCGCCGCTCG
ATCTATCTCT CGACCGTGTT CCTTGCCAAC AAGGCGCGCG TGAAGCAGGA CCGGCCGACG
CTGGCCTATG CGATGACGCT CGGCGTGCGC GTGCCCGACT ACCAGGTGAA CAAGAAGTTC
TGGCTCGACG GCCACTACGA AGGCAGCTCG CTGTTCCGCG ACACGCTGGT GATCGAGATC
GCACCGCCGC AGCCCGACGA CCCGGCGCAG AACTGGAACG TGAAGTACGG CTGGCAGACC
GACACCGCGG GGCAGGCCTC GCTGCCGATG AGCCCCAAGC AGCTGGCCGA CGGCAAGCTG
CAGTTCATCG TGCCGCTTTC GAGCCTGGGC GCGGCGCCGG CGGCACCCGG CATCAGCGGC
AAGGTGCGGC TGGAGGTGAG CGCCTGGAGT TGA
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| Protein sequence | MSSNRYPIIY VRGYAMTEAE RDDTAADPFC GFNVGSTVYR ATVKKDAPAQ KFVFESPVVR
LLADFQYQSV YQNGLDILDN DWKPSPDETG KDVDGIPAAS IVIYRYYDGG SELLGDGKSR
DVKIYAQGLS KLILRVRDLV ALREGAAFSP ADFRCYLVAH SMGGLVVRAF LQNPALGDAA
ARACVDKVFT YATPHNGIDM GGINVPAWLT ANEMNTFNRE RMSEFMDTAP VDGRMDYLPA
AAFPPERFFC MVGSNRGDYE AAKGLSRMFA GHGSDGLVRI ENASLWSIDE ARRSKPVATA
YAFRSHSGYF GIVNSEEAYQ NLVRFLFGDV RVDLWFEVDG VTLPPDLPKD ADVDALYQVE
LLAAPRGKRW YLSRRVAEED SPACRTHKEL TDPEKPERRS IYLSTVFLAN KARVKQDRPT
LAYAMTLGVR VPDYQVNKKF WLDGHYEGSS LFRDTLVIEI APPQPDDPAQ NWNVKYGWQT
DTAGQASLPM SPKQLADGKL QFIVPLSSLG AAPAAPGISG KVRLEVSAWS
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