| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3421 |
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| Symbol | |
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| ID | 7972532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3608501 |
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| End bp | 3609031 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794005 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_002945304 |
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| Protein GI | 239816394 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.366271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTG CCGTTCTCGT CATCGACATG CAGCGTGGCC TCTATGACGA CCTGCCGCGC
CCCCACGAGG CCGCCGAGGT CGCGCAGCGC ATCAACGATC TCACCGGGCG TGCCCGTGCC
GCGGGCGTGC CGGTGGCTTT CATCCAGCAC GAGAACGCCG TCGACCTCGA ATTCGATTCC
GAGCGCTGGC AGCTTTCGAG CGCGCTGGAG GTCGATCCGG ACGACACGAA GATCCGCAAG
GCCACGCCCG ATTCGTTCCT GCGCACGCCG CTGCAGGCAT GGCTCGCGGG GCATGCGGTG
CAGTGCGTGG TGGTCTGCGG CTACTCGTCG GAGTTCTGCG TGGACACCAC CGCGCGCCGC
GCCGCAGCGC TCGGGTACGA GGTCGTGCTT GCGGCCGACA CGCACACATC GCACGACAAG
CCGCACGCCA CCGGCGACTT CATCCGCGCC CACCACAACG CCACGCTGTC GGACATCACG
AGCTTCGGCG TGCCGATCCG CGCGGTGCCC AGCGCGAAGA TCGTGTTCTG A
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| Protein sequence | MKTAVLVIDM QRGLYDDLPR PHEAAEVAQR INDLTGRARA AGVPVAFIQH ENAVDLEFDS
ERWQLSSALE VDPDDTKIRK ATPDSFLRTP LQAWLAGHAV QCVVVCGYSS EFCVDTTARR
AAALGYEVVL AADTHTSHDK PHATGDFIRA HHNATLSDIT SFGVPIRAVP SAKIVF
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