| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3413 |
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| Symbol | |
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| ID | 7972524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3600970 |
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| End bp | 3601956 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793997 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_002945296 |
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| Protein GI | 239816386 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA CAAAAAAGAA CGTGCTGGTC TTCCGGCCCC TGCCTGAAGA CCAGCTGGCG
CGCCTGCAGG CCGCACACCA TGTGACCGTG GCCGATCCGC GCAAGGAGCC CGAGGCCTTT
GCCGCCGCGC TGCCCGGCGC ACATGGACTG ATCGGTGCGA GCCACACGGT CGATGCGGCG
CTGCTCGACG CGGCGCCGCA GCTCCAGGTG ATTTCGAGCA TATCGGTCGG CGTCGACAAC
TACGCGCTGG CGGAACTGCA CAAGCGCGGC ATCGTGCTGT GCCACACGCC CGACGTGCTG
ACCGAGACCG TGGCCGACAC GGTGTTCGCG ATCCTGATGG CCACGCAGCG CCGCGTCGTC
GAGCTCTCGA CCATGGTGCG CGAAGGCCGC TGGACCAAGA ACATCGGCGA CGAACTCTTC
GGCACCGACG TGCACGGCAA GACGCTCGGC ATTCTCGGCT TCGGCCGCAT CGGCCAGGCC
GTGGCCCGGC GCGCGGCGCT GGGCTTTGGC ATGCCGGTGC TCTACCACGC GCGCCGCCCG
GTCGACCTGG CCGCGCAGGC ACCCGAGCTG CAGGGCCGCG CCACGCATAC GCCGCTCGAC
GATCTGCTCG CGCGCTCGGA CATCGTGCTG GCGATGCTGC CGCTGACCGA TGCCACGCGC
GGCATGATCG ACGCCGCCTT CTTCGCGCGC ATGAAGCCCG GTGCGGCCTT CATCAACGGC
GGCCGCGGCG CCACGGTCAA CGAAGAAGCG CTGCTGCACG CGCTCGACCA CGGCACGCTG
CGCGCGGCCG GGCTCGACGT GTTCGCGAAG GAGCCGCTGC CCGCCGATTC GCCATTGCGC
ACGCATCCGC GCGTGACGCC GCTGCCGCAC ATCGGATCGG CCACGCACGA AACGCGGCAC
GCCATGGCGG AGCTTGCGAC GACCAACCTG CTGCAGGTGC TGGCGGGCGA GAAGCCGACG
GCGCCGTACG ACACGGCGGC GGCATGA
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| Protein sequence | MTTTKKNVLV FRPLPEDQLA RLQAAHHVTV ADPRKEPEAF AAALPGAHGL IGASHTVDAA
LLDAAPQLQV ISSISVGVDN YALAELHKRG IVLCHTPDVL TETVADTVFA ILMATQRRVV
ELSTMVREGR WTKNIGDELF GTDVHGKTLG ILGFGRIGQA VARRAALGFG MPVLYHARRP
VDLAAQAPEL QGRATHTPLD DLLARSDIVL AMLPLTDATR GMIDAAFFAR MKPGAAFING
GRGATVNEEA LLHALDHGTL RAAGLDVFAK EPLPADSPLR THPRVTPLPH IGSATHETRH
AMAELATTNL LQVLAGEKPT APYDTAAA
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