| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3398 |
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| Symbol | |
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| ID | 7970636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3578623 |
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| End bp | 3579390 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793982 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_002945281 |
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| Protein GI | 239816371 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.833771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACTCCA ATCCGCGCCA GATCAATCTT CTCGATACCG TGCGCACGCG CGGCTCGGTC
ACCGTCGAAC AGCTGGCCGA CATGCTGGGC GTCACGCTGC AGACAGTGCG GCGCGACGTG
CAGCGGCTGG CCGACCAGGG GTTGCTCACG CGCTTTCACG GCGGCGTGCG CGTGCCGAGT
TCCACCACCG AGAACATCGG CTACCAGCAG CGCGAAACGC TGCATGCAGA AGGCAAGGCG
CGCATCGCGC GGCGCGTGGC CGAGCTGGTG CCCAACGACT GTTCGCTGAT CCTCAACATC
GGCACCACGA CGGAAGCCAT CGCCAAGGCG CTGCTGCGCC ACACGGGTCT GCGCGTGATC
ACCAACAACC TGAACGTGGC GACGATCCTG AGCGGCAACA CCTCGTGCGA GGTGATCGTG
GCGGGCGGTT CGGTGCGCCC GCGCGACCGC GCGATCGTGG GCGAGGCGAC GATCGATTTC
ATCCGCCAGT TCAAGGTGGA CATCGCGCTG ATCGGCGTGT CGAGCATCGA GCCCGACGGG
TCGCTGCGCG ACTTCGACCT GCGCGAGGTG AAGGTGGCGC AAACGATCAT TGCGCAGGCA
CGCGAGGTGT GGCTGGCCGC GGACGCGAGC AAGTTCAACC GGCCCGCGAT GATCCAGCTG
GGCACGCTGT CGCAGATCGA CCGCCTCTTC ACCGACGCGG AGCCGCCGGC GCCTTTTGCC
GATCTGCTGC ATGCGGCGCA GGTTCGGCTC GAGATTGCGC GCGATTGA
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| Protein sequence | MNSNPRQINL LDTVRTRGSV TVEQLADMLG VTLQTVRRDV QRLADQGLLT RFHGGVRVPS
STTENIGYQQ RETLHAEGKA RIARRVAELV PNDCSLILNI GTTTEAIAKA LLRHTGLRVI
TNNLNVATIL SGNTSCEVIV AGGSVRPRDR AIVGEATIDF IRQFKVDIAL IGVSSIEPDG
SLRDFDLREV KVAQTIIAQA REVWLAADAS KFNRPAMIQL GTLSQIDRLF TDAEPPAPFA
DLLHAAQVRL EIARD
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