| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3393 |
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| Symbol | |
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| ID | 7970631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3572655 |
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| End bp | 3573467 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644793977 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002945276 |
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| Protein GI | 239816366 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0838291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATA AGAGATTCCG CAAACGCAGC ATCTTCCTGC TGCTGTACAT CCTGTTCGCG
CTGCTGCCCA TCTACTGGAT GGTCAACATG AGCTTCAAGA CGAACGAGGA AATCGTCTCC
AGCTTCTCGT TCTTTCCACA CGAGCTCACC TGGGCCAACT ACGCGCGCAT CTTCACCGAC
GAGTCGTGGT ACTCGGGCTA CATCAACAGC CTGATCTACG TGGCCATCAA CACCGTGATC
TCGCTCACCG TGGCGCTGCC GGCGGCGTAT GCGTTCTCGC GCTATTCGTT CCTCGGCGAC
AAGCACGTCT TCTTCTGGCT GCTGACCAAC CGCATGACCC CGCCCGCGGT GTTCCTGCTG
CCGTTCTTCC AGCTCTACAG CACCGTCGGC CTCATGGACA CCCACCTGGG CGTGGCGCTC
GCGCACCTGC TGTTCAACGT GCCGCTGGCG GTGTGGATTC TCGAAGGCTT CATGAGCGGC
ATTCCGCGCG AGATCGACGA GACGGCCTAC ATCGACGGCT ACTCGTTCCC GCGCTTCTTC
GTGAAGATCT TCCTGCCGCT CATCAAGGCC GGCGTGGGCG TGGCGGCGTT CTTCTGCTTC
ATGTTCAGCT GGGTCGAGCT GCTGCTCGCG CGCACGCTCA CCAGCGTGAA CGCCAAGCCC
ATCGTCGCGA CCATGACCCG CACCGTGAGC GCCTCCGGCA TGGACTGGGC CACGCTGGCC
GCCGCGGGCG TGCTCACCAT CGTGCCGGGT GCGATCGTGA TCTGGTTCGT GCGCCACTAC
ATCGCAAAAG GCTTTGCGAT GGGTCGGGTC TAG
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| Protein sequence | MNDKRFRKRS IFLLLYILFA LLPIYWMVNM SFKTNEEIVS SFSFFPHELT WANYARIFTD
ESWYSGYINS LIYVAINTVI SLTVALPAAY AFSRYSFLGD KHVFFWLLTN RMTPPAVFLL
PFFQLYSTVG LMDTHLGVAL AHLLFNVPLA VWILEGFMSG IPREIDETAY IDGYSFPRFF
VKIFLPLIKA GVGVAAFFCF MFSWVELLLA RTLTSVNAKP IVATMTRTVS ASGMDWATLA
AAGVLTIVPG AIVIWFVRHY IAKGFAMGRV
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