| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3386 |
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| Symbol | |
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| ID | 7970624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3565594 |
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| End bp | 3566502 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793970 |
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| Product | ABC transporter related |
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| Protein accession | YP_002945269 |
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| Protein GI | 239816359 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.228941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGAAC TGAAGAACCT AGGCCACCGC TATCCGCACG CCGACGCGGC CGCGCTGACC
GACGTCTCGC TTGCGGTGCC CCGGGGCTGT GTCATGGGCC TGCTCGGCCC CAACGGCGCG
GGCAAGACCA CGCTGATCTC GCATCTGTCG GGCGCGCTCG CCGTGCAGTG GGGCGAGATC
CTCATCGACG GCCAGCCGCT GCAGCAGGTG CGCGCCAAGG CACCCACGCG CATCGCGGTG
GCGCCGCAGG ACCAGGCCTT CTATCCGATG CTCACCGTGG CCGAGAACCT CGCATGCTTT
GCCGCGGCGG GCGGCCTGGC CGGTGCGCGC AAGAAGGCGC GCATCGAGGC CTGCACGCAC
TTTGCGCAGC TCGAACAGTT TGCCGGCGTG CGCGCCGAAC GTCTCTCGGG CGGCCTCAAG
CGCCGCCTCA ACCTGGCCAT CGCGTTGCTG CCCGAGCCCG AGCTGATGCT GTTCGACGAG
CCCACGGTGG GCGTCGATCC GCAGTCGCGC GCCTTCATCC TCGATGCCAT CAAGAGCCTG
GCGCAGCAGG GCGCGGCGGT GATCTATGCC TCGCACTACA TGGAAGAGAT CGAGGCCATT
GCCGATCGCG TGGCCATCCT CGACCATGGC CGCGTACTGC GCGAAGGCTC GCTCGAGCAA
CTGCTGTCCA AGAGCGCCAT GCTGCTCACG CTGGCCGCCG ACGGGCTCGA CGCGCAGAAG
CTCTCGCGCT TCGGCACGGT GGAGCAGGGC GGCGTGCACT GGCGCATTCA CCTGCGCGAA
GGCACCGGGC CCGGCCCCGT GCTGCAGGCG CTGGAGGCCG AAGGCATCGA AGTACGCCAC
GCCGAGTTCG GCCGCCACGA TCTCGAGCAG CTCTTCATGG CGCTCACCCA TCGCTCGCTG
CGCGACTGA
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| Protein sequence | MLELKNLGHR YPHADAAALT DVSLAVPRGC VMGLLGPNGA GKTTLISHLS GALAVQWGEI
LIDGQPLQQV RAKAPTRIAV APQDQAFYPM LTVAENLACF AAAGGLAGAR KKARIEACTH
FAQLEQFAGV RAERLSGGLK RRLNLAIALL PEPELMLFDE PTVGVDPQSR AFILDAIKSL
AQQGAAVIYA SHYMEEIEAI ADRVAILDHG RVLREGSLEQ LLSKSAMLLT LAADGLDAQK
LSRFGTVEQG GVHWRIHLRE GTGPGPVLQA LEAEGIEVRH AEFGRHDLEQ LFMALTHRSL
RD
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