Gene Vapar_3374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3374 
Symbol 
ID7970612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3553535 
End bp3554284 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID644793958 
ProductElectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_002945257 
Protein GI239816347 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0752119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTC TAGTGCCTGT CAAACGGGTC GTCGATTACA ACGTCAAGGT GCGCGTGAAG 
AGCGACGGCA CCGGAGTGGA CATTGCCAAC GTCAAGATGA GCATGAACCC CTTCGACGAG
ATCGCCGTGG AAGAAGCCGT GCGCCTGAAG GAAAAGGGCG TGGTCACCGA AGTCATCGCC
GTCTCCTGCG GTGATGCCAA GTGCCAGGAA ACCCTGCGCA CCGCCATGGC CATCGGTGCC
GACCGCGGCA TCCTGGTCGA GACCACCGAA GAGCTGCAAC CCCTGGCCGT GGCCAAGCTG
CTGAAGGCCC TGGTCGACAA GGAACAGCCC CAGCTGATCA TCCTGGGCAA GCAGGCCATC
GACGACGACG CCAACCAGAC CGGCCAGATG CTCGCCGCGC TGGCCGACCT GCCGCAAGCC
ACCTTCGCCT CCAAGGTCGA AGTGGCCGAT GGCAAGGCCA CCGTCACGCG CGAAGTCGAC
GGCGGCCTGG AGACCATCAC GCTCAGCCTG CCGGCCGTCA TCACCACCGA CCTGCGCCTG
AACGAGCCGC GCTATGTGAC GCTGCCCAAC ATCATGAAGG CCAAGAAGAA GCAACTCGAC
ACCTTCGAGC CCGAAGACCT GGGCGTGGAC GTGAAGCCGC GCCTGAAGAC CCTCAAGGTC
AGCGAGCCGC CCAAGCGCGG CGCCGGCATC AAGGTGCCTG ACGTCGCGAC CCTGGTGGAC
AAGCTCAAGA ACGAAGCCAA AGTGATCTGA
 
Protein sequence
MKVLVPVKRV VDYNVKVRVK SDGTGVDIAN VKMSMNPFDE IAVEEAVRLK EKGVVTEVIA 
VSCGDAKCQE TLRTAMAIGA DRGILVETTE ELQPLAVAKL LKALVDKEQP QLIILGKQAI
DDDANQTGQM LAALADLPQA TFASKVEVAD GKATVTREVD GGLETITLSL PAVITTDLRL
NEPRYVTLPN IMKAKKKQLD TFEPEDLGVD VKPRLKTLKV SEPPKRGAGI KVPDVATLVD
KLKNEAKVI