| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3366 |
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| Symbol | |
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| ID | 7970604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3542140 |
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| End bp | 3543294 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793950 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_002945249 |
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| Protein GI | 239816339 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCTGC ATCAACTCAT CGACTACGAC ACGCTTCGAA TCATCTGGTG GGCGCTGATC
GGCGTGCTGC TGGTCGGCTT TGCCGTGACT GACGGCTTCG ACCTGGGAAG CGGCATCCTG
CTGCCGTTTG CCGCGCGCAC CGACCTCGAG CGTCGCCTGG TCATCAACAG CGTGGGCCCG
GTATGGGAGG GCAACCAGGT GTGGCTGATC GTTGGCGGCG GCTCGATCTT CGCGGCCTGG
CCGCAGCTGT ACGCGGTGTC GTTCTCGGGC TTCTACCTGG CGATGTTCGT GATTCTCACG
GCGCTCATCC TGCGGCCCGT GGCCTTCAAG TTCCGCAGCA AGCGCGAGGA GCCGGCCTGG
CGCGCGCGCT GGGACGCGGT GCTTTTCTTC AGCGGCCTGG TGCCCGCGCT GATCTTCGGT
GTGGCTGTGG GCAACGTGCT GCAGGGCGTG CCGTTCCGCT TCGCGGCGGA CATGCACATC
CACTACGACG GCAGCTTCTT CGCGCTGCTC AATCCGTTCG CGCTGCTGTG CGGGCTGGTG
TCGGTGGCGA TGATGGTCGC GCACGGCGCG GCGTGGCTGC AGCTCAAGAC CGCGGGCCCG
GTGGCCGAGC GCGCGCGCCT CTATGGCAGC GTTGCCGCGG TGGCCGGCAT CGCGCTGTAT
GCGCTGGCGG GCATGTGGAT GGCCTCGGCC ATCGGCGGCT ACCGCATCAC GAGCGCGGCC
CAGATGGTGG GGCCGTCCAA TCCGCTCCTG AAGACCGTCG AGCTGCACGC AGGTGCATGG
CTTGCCAACT ATGCGGCCCA TCCCTGGACC ATGGCCGCGC CGGCGGCGGG CTTTGCCGGC
CTGCTGGGGG CGCTCGGGGG CCTGCTGCTG CGCCGGCCCG TGCTCGCGCT GCTGGCGGCC
GCGCTCGGCA TTGCCGGCAT CATCCTGAGC GTGGGCGCAT CGATGTTCCC GTTCATCCTG
CCGTCGTCGA TCGACCCGCG CGCGAGCCTC ACGGTGTGGG ACGCATCATC GAGCCACCTC
ACGCTCTTCA TCATGCTGGT GGTCACGGGC ATCTTCATTC CCATCATCGT GGCCTACACC
ACCTGGGTCT ACCACGTGCT GTGGGGCAAG GTCGACGAAA AGGCGATCCG CGAAGAGAGC
GGACACGCGT ACTGA
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| Protein sequence | MILHQLIDYD TLRIIWWALI GVLLVGFAVT DGFDLGSGIL LPFAARTDLE RRLVINSVGP
VWEGNQVWLI VGGGSIFAAW PQLYAVSFSG FYLAMFVILT ALILRPVAFK FRSKREEPAW
RARWDAVLFF SGLVPALIFG VAVGNVLQGV PFRFAADMHI HYDGSFFALL NPFALLCGLV
SVAMMVAHGA AWLQLKTAGP VAERARLYGS VAAVAGIALY ALAGMWMASA IGGYRITSAA
QMVGPSNPLL KTVELHAGAW LANYAAHPWT MAAPAAGFAG LLGALGGLLL RRPVLALLAA
ALGIAGIILS VGASMFPFIL PSSIDPRASL TVWDASSSHL TLFIMLVVTG IFIPIIVAYT
TWVYHVLWGK VDEKAIREES GHAY
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