Gene Vapar_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3360 
Symbol 
ID7970598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3539848 
End bp3540318 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content71% 
IMG OID644793945 
ProductActivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_002945244 
Protein GI239816334 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG CTGCCGCCCC CGCCACCGAG CGACCCTCGC TCACCCTCCG CAGGCACTAC 
CCCGTCGCCC CCGAAAAAGT CTGGCGCGCG TGGACCGACC CGCAAGCGCT GAAGGCCTGG
TTCGGCCCTG AGGAAATCGT TGCCGTGCCG CTGGCCGAAG TCGACCTGCG CGTGGGCGGG
CGCTTTCGGG TGGCCATGCG CGCGGCCGAC GGCCAGACGC ACGACGTGAG CGGCACCTAC
CTGGAGCTCG TGCCCAACCG CAAGCTGGTC TTCAGCTGGG CCTGGCGCAG CACGCCGGAG
CGCGAGTCGC GCGTCACGGT GCGCATCGAG CCCGACGGCA ATGGCTGCGA ACTGGTCCTG
CTGCACGAGC AGTTCTTCGA CGAGGCCGCG CGCGACGGGC ACAGCCATGG CTGGACCGGC
GCCATGGGCA AGCTCGGGAA GTGGCTGGCA GGGCAGCAGC AGGGCGCCTG A
 
Protein sequence
MAKAAAPATE RPSLTLRRHY PVAPEKVWRA WTDPQALKAW FGPEEIVAVP LAEVDLRVGG 
RFRVAMRAAD GQTHDVSGTY LELVPNRKLV FSWAWRSTPE RESRVTVRIE PDGNGCELVL
LHEQFFDEAA RDGHSHGWTG AMGKLGKWLA GQQQGA