| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3358 |
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| Symbol | |
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| ID | 7970596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3538438 |
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| End bp | 3539550 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793943 |
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| Product | chorismate synthase |
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| Protein accession | YP_002945242 |
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| Protein GI | 239816332 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCA ACACCTTCGG AACTCTCTTC GCGGTCACCA ATTTCGGCGA GTCGCACGGC
CCGGCCATCG GCTGCGTCAT CGACGGCTGC CCGCCGGGCA TGGAACTGAG CGAGGCCGAC
ATCCAGGGCG ACCTCGACCG CCGCCGCCCC GGCACCAGCC GCCACGTCAC CCAGCGCAAC
GAGCCCGACG CGGTGCAGAT CCTTTCCGGC GTCTACGAAG GCAAGACCAC CGGCACCCCG
ATTGCGCTGC TGATCCAGAA CACCGACCAG CGCAGCAAGG ACTACGGCCA GATCGCCCAG
CAGTTCCGCC CCGGCCACGC CGACTTCACC TACTGGAAGA AATACGGCAT CCGCGATCCG
CGCGGCGGCG GGCGCTCTTC GGCGCGGCTC ACGGCGCCCA TGGTGGCGGC GGGCGCGGTC
GCCAAGAAGT GGCTGGCCGA AAAATACGGC ATGGTGTTTC GCGGCTGCAT GACACAGATC
GGCGAGATCG CCATTCCGTT CGAGAGCTGG GACCACGTGC CCGCCAACCC CTTCTTCGCG
CCGATGGCCG ACGTGAGCGA GCTCGAGGCC TACATGGACC GCCTGCGCAA GGCCGGCGAC
TCCTGCGGCG CGCGCATCCG CGTCACGGCC GGCAACGTGC CCATCGGTTT GGGCGAACCG
CTGTTCGACA AGCTCGACGC CGAGATCGCC TACGCGATGA TGGGCATCAA CGCCGTGAAG
GCGGTGGAGA TCGGCGCCGG CTTCGAGAGC ATCACGCAGC GCGGCACCAC GCACGGCGAT
TCGATCACGC CCACGGGCTT CGTCACCAAC AACGCGGGTG GCATCCTGGG CGGCATCAGC
TCGGGGCAAG ACCTCGAAGT GAGCATCGCG ATCAAGCCCA CCAGCTCGAT CATCAGCCCG
CGCCAGTCCA TCGACATCCA CAACAACCCG GTCGAGGTGG TCACCAAGGG CCGCCACGAT
CCGTGCGTCG GCATTCGCGC GACGCCCATC GCCGAGGCCA TGCTTGCGCT GGTGGTCATG
GAGCACGTGC TGCGCAACCG CGCGCAGTGC GGCGATGTGC AAACGCAAGC CGAGAAGCCG
GAATCCGCCT CGCCGCAGGC GTCCTTTCTC TAG
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| Protein sequence | MSGNTFGTLF AVTNFGESHG PAIGCVIDGC PPGMELSEAD IQGDLDRRRP GTSRHVTQRN
EPDAVQILSG VYEGKTTGTP IALLIQNTDQ RSKDYGQIAQ QFRPGHADFT YWKKYGIRDP
RGGGRSSARL TAPMVAAGAV AKKWLAEKYG MVFRGCMTQI GEIAIPFESW DHVPANPFFA
PMADVSELEA YMDRLRKAGD SCGARIRVTA GNVPIGLGEP LFDKLDAEIA YAMMGINAVK
AVEIGAGFES ITQRGTTHGD SITPTGFVTN NAGGILGGIS SGQDLEVSIA IKPTSSIISP
RQSIDIHNNP VEVVTKGRHD PCVGIRATPI AEAMLALVVM EHVLRNRAQC GDVQTQAEKP
ESASPQASFL
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