| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3353 |
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| Symbol | |
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| ID | 7970591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3532732 |
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| End bp | 3533691 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793938 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002945237 |
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| Protein GI | 239816327 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAT CTCCGAAGCA CCACATCCCG TGGGGCGCCC TGGGGCCGTG GCTGGCTCTG
CTTGGCGCAT GCATCTTCTT TGCGACCCAG TCCGACCGTT TCCTCACGGG GGACAACCTC
TCGCTGATCC TGCAGCAGGT GATGGTGGTC GGCGTGATCG CCATCGGCCA GACGCTGATC
ATCCTCACGG CGGGCATCGA CCTGTCGTGC GGCATGGTGA TGGCGCTGGG CGGCATCATC
ATGAGCAAGT TCGCGACCGA GCTCGGGCTG CCGGTGCCGG TGGCCATTCT TTGCGGCATC
GGCGTGACCA CGCTGTTCGG CCTGGTCAAC GGCCTCTTGG TCACGCGCAT CAAGCTGCCG
CCCTTCATCG TGACCTTGGG CACGCTGAAC ATCGCCTTCG CGATCACGCA GCTGTATTCG
TCCTCGCAGA CCGTCACCGA CCTGCCCGCC GGCCTCACGG GCCTGGGCAC CACCTTTGCC
GTCGGCGGCG CCGCGGTGGC CTGGGGCGCG GTGCTGATGC TGGTGCTCTA TGCGCTCGCG
TGGTTCGTGT TGCGCGAGAC GGCCGCGGGG CGGCATATCT ACGCGGTGGG AAACAACGCA
GAAGCCACGC GCCTGGTGGG CATTCCCACG CAGCGCGTGC TGCTGGGCGT TTACGTGGCG
GCGGGCGCGC TCTACGGCAT TGCCTCGCTG CTGTCGGTGG CGCGCACCGG CGTGGGCGAC
CCGAACGCGG GGCAGACCGA GAACCTCGAC GCCATCACGG CGGTGGTGCT CGGCGGCACC
AGCCTGTTCG GCGGCCGCGG CGTGGTGCTG GGCTCGCTGA TCGGCGTGCT GATCGTGGGC
GTGTTCCGCA ACGGGCTCAC GCTGATGGGC GTGTCCTCGA TCTACCAGGT GCTGGTGACG
GGCGTGCTCG TGATTTTGGC GGTGGCGGCA GACCAGCTGT CGCGCCGGGG AGCCCGCTGA
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| Protein sequence | MAKSPKHHIP WGALGPWLAL LGACIFFATQ SDRFLTGDNL SLILQQVMVV GVIAIGQTLI
ILTAGIDLSC GMVMALGGII MSKFATELGL PVPVAILCGI GVTTLFGLVN GLLVTRIKLP
PFIVTLGTLN IAFAITQLYS SSQTVTDLPA GLTGLGTTFA VGGAAVAWGA VLMLVLYALA
WFVLRETAAG RHIYAVGNNA EATRLVGIPT QRVLLGVYVA AGALYGIASL LSVARTGVGD
PNAGQTENLD AITAVVLGGT SLFGGRGVVL GSLIGVLIVG VFRNGLTLMG VSSIYQVLVT
GVLVILAVAA DQLSRRGAR
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