| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3352 |
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| Symbol | |
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| ID | 7970590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3531935 |
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| End bp | 3532732 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793937 |
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| Product | ABC transporter related |
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| Protein accession | YP_002945236 |
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| Protein GI | 239816326 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCCG TCGCAAACCC CAAGATCGTG ATGCAGGCCC GGGGCCTGGT GAAGCGCTAT
GGCCAGGTCA CGGCGCTCGA CGGTGTCGAC TTCGAGCTGC GCGAAGGAGA AATCCTCGCG
GTGATCGGCG ACAACGGCGC GGGCAAGTCG TCGCTGATCA AGGCGCTGTC GGGCGCCATC
GTGCCCGACG AGGGCGAGAT CCTGCTCGAC GGCTCGCCGG TGCACTTCCG CAACCCGCTC
GATGCGCGGC GCGCGGGCAT CGAGACGGTC TACCAGGACC TGGCCGTGGC GCCCGCCATG
ACCATCTACG AGAACCTCTT TCTCGGCCGC GAGCTGCGTC GCCCGGGCTT CCTGGGCAAC
ATGCTGCGCA TGCTCGACAA GAAGAAGATG CTGCACGAAA GCGCGGCCCG CATGGCGGAC
CTGAAGGTCG GCATCCAGTC GATGACGCAG GCGGTGGAAA CGCTCTCGGG CGGCCAGCGC
CAGTGCGTGG CGGTGGCGCG CAGCGCGGCC TTCGCGCGGC ACGTGGTCAT CATGGACGAG
CCCACCGCCG CGCTTGGCGT GAAGGAGGGC AACATGGTGC TCGAGCTGAT CCGCCGCGTG
CGCGACCGCG GCCTGCCGGT GGTGCTCATC AGCCACAACA TGCCGCATGT GTTCGAGGTG
GCCGACCGCA TCCACGTGGC GCGCCTGGGC AGGCGAGCGG CGGTGCTCAA CCCCAAGAAC
ATCAGCATGA GCGACACGGT GGCCGTGATG ACCGGCGCCA TGACCGCCGA CCAGCTGCCC
GCGGAGGCGC ATGCCTGA
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| Protein sequence | MNAVANPKIV MQARGLVKRY GQVTALDGVD FELREGEILA VIGDNGAGKS SLIKALSGAI
VPDEGEILLD GSPVHFRNPL DARRAGIETV YQDLAVAPAM TIYENLFLGR ELRRPGFLGN
MLRMLDKKKM LHESAARMAD LKVGIQSMTQ AVETLSGGQR QCVAVARSAA FARHVVIMDE
PTAALGVKEG NMVLELIRRV RDRGLPVVLI SHNMPHVFEV ADRIHVARLG RRAAVLNPKN
ISMSDTVAVM TGAMTADQLP AEAHA
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