| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3351 |
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| Symbol | |
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| ID | 7970589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3530719 |
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| End bp | 3531942 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793936 |
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| Product | ROK family protein |
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| Protein accession | YP_002945235 |
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| Protein GI | 239816325 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGATG CAGAAGCCCC TGCGCGCTCG CCCGACCTGC TGCGGCCCCG CGGGTCCAAC
CAGGTCGGCA TGCGCCAGTT CAACGAGCGC ACGGTGCTGC AGGCGCTGCG CGTCCACACC
AGCCTGCCCA AGGCCGACCT CGCGCGGCTC ACCGGGCTGA GCGCGCAGAC CATCGGGCTC
ATCACCGCGC GGCTCGAGGA AGACGGGCTC ATCGTCAAGC AGGGGCGCGT GCGCGGCCGC
ATCGGGCAGC CTTCGGTGCC GCTCGCGCTC AACCCCGACG GGGCCTTTGC CATCGGCATC
AAGGTGGGCC GGCGCGGCGC CGAATGGCTG CTGATCGACT TCACCGCGAA GGTGCGCGAG
CGGCATGCGA TCAGCTACGA CTTTCCCGAT GCGGACGAGC TGCTGCCCGC CATCGCGCAG
CACATCCACC GGCTGCGCGA GGGCCTCGGG CCGCTGGCCG TGCGCAACGT GGGCGCGGGG
CTGGCCGCGC CGTTCCAGCT GGGCGGCTGG CACCGCACGC TGGGCTTGTC GAAGGCACAG
GCCGACCTCT GGAACCAGAT GGACCTGGCG GCCGAGGTGC GCGCGCGCAC CGAGGTGCCC
GTGAGCTTTG CGCGCGACAC CGTGGCGGCC TGCGTGGCCG AGTTGGTGGG CGGGCGCGGC
CATGACCTGA AGAGCTTTCT CTACATCTTC GTCGACACCT TCGTGGGCGG CGGGCTGGTC
ATCAACTCGC ACCTGCACAC GGGCGCGCAC AGCAACGCGG GCGCGTTGGC TTCGTTGCCG
ATGCAGTCGG TGCGAGCCGA TGGCGCGCTG CCGCCGCAGG TGATGGCCGA GGCCTCGCTG
TGGGAGCTGG AGCAGCGCCT GCAAGGCGAA GGGCTCGATC CTGCCGCGGC CTACGACGAC
CGCGCGTTGC AGCCCCCGTT TGCCGCCGCA ACGCAGTCAT GGCTCGGCTC CGCATCGCTG
GCATTGGCGC ACGCCATCGT CAGCGGCACC GCAGTGCTCG ATCTGGCCGA CGTGGTGATG
GACGGTTCCA TGTCGCGCGC ATTGCTCCAG GCCCTTCTGG AACAGACGCG CGCCGCGCTC
GCGCAATGCA ACTGGGAGGG CCTGTGGCCG CCGCAGTTGC ACGGGGGCAG GGTGGGGGCG
CAGGCCTGTG CGCTCGGCGG GGCGATGCTG CCGCTGCACG CCAACTTCGC GCCCGACCAT
GACGTGTTCC TCAAGGCTGG TTGA
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| Protein sequence | MPDAEAPARS PDLLRPRGSN QVGMRQFNER TVLQALRVHT SLPKADLARL TGLSAQTIGL
ITARLEEDGL IVKQGRVRGR IGQPSVPLAL NPDGAFAIGI KVGRRGAEWL LIDFTAKVRE
RHAISYDFPD ADELLPAIAQ HIHRLREGLG PLAVRNVGAG LAAPFQLGGW HRTLGLSKAQ
ADLWNQMDLA AEVRARTEVP VSFARDTVAA CVAELVGGRG HDLKSFLYIF VDTFVGGGLV
INSHLHTGAH SNAGALASLP MQSVRADGAL PPQVMAEASL WELEQRLQGE GLDPAAAYDD
RALQPPFAAA TQSWLGSASL ALAHAIVSGT AVLDLADVVM DGSMSRALLQ ALLEQTRAAL
AQCNWEGLWP PQLHGGRVGA QACALGGAML PLHANFAPDH DVFLKAG
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