| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3333 |
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| Symbol | |
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| ID | 7970571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3512416 |
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| End bp | 3513822 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793918 |
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| Product | histidine kinase |
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| Protein accession | YP_002945217 |
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| Protein GI | 239816307 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCATTG CGGCTCGCCT GCGGCGCGCT AGCCTGTGGC AGCGGCTCGC GCTGCTGCTG
TTCCCTGCCC TGCTGCTGGT GACCGGCATC GAGCTGTGGA TGACGCGGCA CGACGCGCTG
GCCGCCGCCA ATGCGGCCTA CGACCGTTCG CTGCTCGGCG CGCTCAAGTC GATCGACGCC
AACATCTCCA CGGCCTCGGG CGGCCTCTCG GTCGAGCTGC CCTACACGAT GTTCGAGTTC
TTCGAGCTCA CGGCCAGCGG CCAGGTGTTC TTTCGCGTGG CGACCTCCGA CGGGCTGGTC
GAACTCGGCA GCGCCGACCT GCCCGCGCCG CCCGCCACGC TGGCCATGGG CGTGCCGGCC
TTTTACGACG CAACCTACTT CGGCGAGTCC GTGCGGCTGG CGGCCTACCG GCGCGACCTC
GACCGCGCGC CGGCCGGCAG CACCGGACGC AGCGTGCTGA TCCAGGTGGG CGAAAGCACG
CGCTCGCGGC AGGAGTTCAC CGCACGTTTT GTCCGCAGCG CCGCGCTGCG CGACGGGCTG
GTGCTGGCGA TGCTGCTGTG CGGCACCGCG CTTGCGCTTG CGGCGGCGCT GCGGCCGCTG
TCGAGGCTGG CGCGCGAGGT GCAGGCCCGC ACGCCGGACG ACCTGACGCG CATCGCGGAG
GCCGACCTGC CGGCCGAGGT ACGCCCGCTC GTCGCAGCGG TCAACCAGCA GATGTCGCGC
ACGCAGGAAC TGGTGGCGCA GCAGCGCCAG TTTCTCGACG ATGCGTCCCA CCAGCTGCGC
ACCCACCTCA CCACGCTGCA GATGCAGGCC GACTACGCGA AGCGCGAGCA GGACCCGGCG
CAGGTGCAGG CCACGCTCGA TGCGCTCGGC ACCGAGATCG GCCGAGCGAC GCGCAGCGCG
CAGCAGCTGC TTGCGCTGGG CCGCAGCGAC ACGGTGGCGG TGGAACCCGC CGAATTCGAC
CTTGCGGCGC TGCTGCGCGA AGTGGCCGTC GACCTGCTGC CGCTCGCGCG CGCCAAGCGC
ATCGACCTGG GCATCCATGC GCCCGCGCCG GAGTTCTTCG CGGTGGCGGA CCGCGGGCTG
CTGCGCGAGG CGTTGAGCAA CCTTGTGGCA AACGCCGTCG CCTACACGCC GGCCGAAGGC
ACGATCACGC TCTTCGCGGC GGGCGATGCG GCGGGCTGGA GCCTCAACGT CGAAGACGAC
GGTCCGGGCC TGAGCGGCGA AGAGCGCGCC GCGCTGGGCC AGCGCTTTCG CCGCGGCGCC
CGCGCGGGCA AGGGCGGCTT CGGCCTCGGC CTGGCCATTG CACGCTCCAT CGCGCAGCGG
CACCGGGGAG AGCTGCGGCT CGAGGCACGC GAGGCAGGCA CGGGCCTGCA TGCGATCATC
TGGTGGCCTC GGCCGGCCGC CAGCTAG
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| Protein sequence | MSIAARLRRA SLWQRLALLL FPALLLVTGI ELWMTRHDAL AAANAAYDRS LLGALKSIDA
NISTASGGLS VELPYTMFEF FELTASGQVF FRVATSDGLV ELGSADLPAP PATLAMGVPA
FYDATYFGES VRLAAYRRDL DRAPAGSTGR SVLIQVGEST RSRQEFTARF VRSAALRDGL
VLAMLLCGTA LALAAALRPL SRLAREVQAR TPDDLTRIAE ADLPAEVRPL VAAVNQQMSR
TQELVAQQRQ FLDDASHQLR THLTTLQMQA DYAKREQDPA QVQATLDALG TEIGRATRSA
QQLLALGRSD TVAVEPAEFD LAALLREVAV DLLPLARAKR IDLGIHAPAP EFFAVADRGL
LREALSNLVA NAVAYTPAEG TITLFAAGDA AGWSLNVEDD GPGLSGEERA ALGQRFRRGA
RAGKGGFGLG LAIARSIAQR HRGELRLEAR EAGTGLHAII WWPRPAAS
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