| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3332 |
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| Symbol | |
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| ID | 7970570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3511754 |
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| End bp | 3512419 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793917 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002945216 |
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| Protein GI | 239816306 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCC TGCTGGCCGA AGACGAACAC ACCCTGGGCA CCTGGCTCTG CAAGGCGCTG
GAGCATGCGG GCATCCAGGT CGAATGGGTG GACGATGGCC GGCTGGCAGA CCGCGCCTTG
CAGCAGCGCG ACCACGACGC GCTGGTGCTC GACCTCGGCC TGCCGGGCAT GGACGGCCAC
ACGGTGCTGC AGCGGCTGCG CGAGCGCGAC CAGCGGCTGC CCGCGCTGAT CCTCACCGCG
CGCGATTCGC TGAACGAGCG CGTGGCCTCG CTCAACGCGG GCGCCGACGA CTTCCTCGCC
AAGCCCTTTG CGCTGGCCGA GCTCGAGGCG CGGCTGCATG CGCTGGTGCG CCGCGCGCGC
GGCGTGGAGC ATCCGCGCCT GGCCTGCGGC CCGCTCGCGT ACGACGGCGC GCGCCGCCAG
TTCGTGCTGG GCGGCGAGGC GCTGGCGCTG TCGCCGCGCG AACAGGCGGT GCTGCGCGCG
CTGGTGCAGC GCAGCGGCGA GCCGCTGTCC AAGCAGCAGA TCCTCGACCG CGTGTTCTCC
GACGACGACG AGGTGCATCT GGAAGCTGTC GAGGTGCTGG TCTACCGGCT GCGCAAGCGG
CTCGACGGCA GCGGCGTGCG CATCGTGACG CTGCGCGGCC TGGGCTACGT GCTGGAGACC
GAGTGA
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| Protein sequence | MRILLAEDEH TLGTWLCKAL EHAGIQVEWV DDGRLADRAL QQRDHDALVL DLGLPGMDGH
TVLQRLRERD QRLPALILTA RDSLNERVAS LNAGADDFLA KPFALAELEA RLHALVRRAR
GVEHPRLACG PLAYDGARRQ FVLGGEALAL SPREQAVLRA LVQRSGEPLS KQQILDRVFS
DDDEVHLEAV EVLVYRLRKR LDGSGVRIVT LRGLGYVLET E
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