| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3322 |
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| Symbol | |
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| ID | 7970560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3501983 |
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| End bp | 3503203 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793907 |
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| Product | drug resistance transporter, Bcr/CflA subfamily |
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| Protein accession | YP_002945206 |
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| Protein GI | 239816296 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGGGC CGCGCATCCG CAAGGACCGG TTCGAGATCG GCTTCGGCCT GCTGCTGCCG
CTGCTGCTCG CAGCGCAGCC CGTGGCCACC GACAGCTACC TGCCCGCGCT GCCCGCCATC
GCCAAGGAGC TGGGCTCGGC CAGCACCAGC CTCACGCTCT TTGTGCTGGC CTTCGGTTTT
GCACAGTTGC TGTGCGGCCC GCTGGCCGAC CGCTTCGGCC GCCGGCCGGT GCTGCTGGCG
GGGCTCGGCT GCTACGCGAT CGCGGCGCTG GGCGGCGCCT TCGCCGGCAG CGTGGCGGTG
CTCGCGGGCT GGCGCACGCT GCAGGGCTTT TCGATGGCGG CCATCCTGGT GTGCGCGCGC
GCCGCGGTGC GCGACCTCTA TCCCGCGCAC GAAGGTCCGC ACGTGATGGC GCGCGGGCTC
ACGGGCCTGG GCGTGGTGGG GCTGCTGGCG CCGCTCCTGG GCGCATGGCT GGTGCAGGGC
GCCGGCTGGC GCTGGGTGAT GGCGTCGATG GCGCTCTACG CGCTGGTGCT GCTTGCCCTC
TGCTGGCGCT CGTTCGCGGA AACGCGGCGG CCGCTGGCGG GCGAGCCTTC GGCGCCGCGC
GGCAGCACCC GCGCCGTGTT CGCGAGCCGC AGCTTCCGGG CCTGGGCCTC GGTGGCCGCA
ACCACCTACG GCGGCCTTTT CTGCTTCCTG CTGCTGTCGC CGATGGTCTA CATCGGCTAC
CTGGGCTGGT CGCCCGCGAT GTACGGCTGG ATTCCCGCCG GCGGCTCGCT GGTCTACATC
TTCAGCACCA CGATGTGCCG GCGGCTGCTG CGCCGGTACG GGCCGGTGGG CACCGTGCAG
CTGGGCGCCA CGCTGAGCAT CACGGGCGCG GCGATCCAGG CGCTGGGCTG CTGGCTGGCG
CCGCACAGCG CGCTGCCGCT GCTCGCGGGC CACGCGGTCT ATTGCCTGGG CCACGGCATC
CACCAGCCCT GCGGCCAGGC CGGCGCCGTG GGCGACCTGC CGCACCTTGC GGGGCGGGCC
GTGTCGTGGT CGGGTTTCGG CATGATGATG GTGGCGTTCA GCGTCGGGCA GGTGGCCGCG
CAGTTCGTCG ACACCAATTT TTCGAACGGC GCCTGGCCGA TGGTCGTTCC GATGCTGCTC
GCGGGCTGCG GGTTGCTGGC CATCGCGTTC CTCTGGCTGC CCCGTCTTCA ACATCCGATC
AAAGAAAAGG AATCAACATG A
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| Protein sequence | MTGPRIRKDR FEIGFGLLLP LLLAAQPVAT DSYLPALPAI AKELGSASTS LTLFVLAFGF
AQLLCGPLAD RFGRRPVLLA GLGCYAIAAL GGAFAGSVAV LAGWRTLQGF SMAAILVCAR
AAVRDLYPAH EGPHVMARGL TGLGVVGLLA PLLGAWLVQG AGWRWVMASM ALYALVLLAL
CWRSFAETRR PLAGEPSAPR GSTRAVFASR SFRAWASVAA TTYGGLFCFL LLSPMVYIGY
LGWSPAMYGW IPAGGSLVYI FSTTMCRRLL RRYGPVGTVQ LGATLSITGA AIQALGCWLA
PHSALPLLAG HAVYCLGHGI HQPCGQAGAV GDLPHLAGRA VSWSGFGMMM VAFSVGQVAA
QFVDTNFSNG AWPMVVPMLL AGCGLLAIAF LWLPRLQHPI KEKEST
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