Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3319 |
Symbol | |
ID | 7973715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3497747 |
End bp | 3499156 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644793904 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002945203 |
Protein GI | 239816293 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.621716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACCA TCACGGCCCA CGAGCCGAAA GGCAAGCACC AGTCGAAGAA GGCCACCGCG AGCGGCTGGA TCGGCTCGGC GCTGGAGTAC TACGACTTCT TCATCTACGC CACTGCGGCG GCGCTGATCT TTCCGCAGAT CTTCTTTCCC AAGGGCGACC CGCAGATCGC GATCATCGCG TCGCTCGCGA CCTACGGCGT GGGCTACGTC GCACGGCCGA TCGGTGCGCT GCTGCTGGGC CACTGGGGCG ACACGCACGG CCGCAAGACG GTGCTCATTT TGTGCATGTT CCTGATGGGC TTTTCCACCG TCGCCGTCGG CCTGCTGCCC ACCTACGACC AGGTCGGCCT GTGGGCGCCC GCGCTGCTGG TGCTGCTGCG CCTGATCCAG GGCTTTGCGG TGGCTGGCGA GATCTCGGGC GCGAGCTCGA TGATCCTAGA GCACGCGCCG TTCGGACGCC GCGGCTTCTT CGCGAGCTTC ACGCTGCAGG GCGTGCAGGC CGGCCAGATC ATGGCGGCCG CGGTGTTCCT GCCGCTCGCG CACTACATGG ACAAGGACGC TTTCAACGCC TGGGGCTGGC GCATTCCGTT CCTGCTGAGC TTCATCGTCA TCGTGGCCGG CTACATCATC CGCAGGGAAG TGGAGGAGAC CCCCGCCTTT GCCGAAGTCG AGAAGAGCGC GCAGGTGCCG AAGGCGCCCG TCATCCAAGC CGTGACCGAG AGCTGGGGCG ACATGCTGCG CGTGCTGCTG TGCTCGCTGA TGAACGTGAT CCCGGTGGTC GCGACCATCT TCGGCGCCGC CTACGCGGTG CAGCCGGGCT ACGGCATCAA CTTCGAGAAG GACATCTACC TCTGGATTCC GGTGATGGGC AACATCCTGG CCGTGATCGT GATCCCGTTC GTCGGCAACC TGTCGGACAA GGTCGGGCGC CGCCTGCCGA TCGCCGTGGG TGCCATCGGT TCGGGCCTGC TGTCGTTCGG CTACCTGTAT GCCATCAGCA TCCACAACGT GCCGCTGGCC ATCGTGATGT CGCTGCTGAT GTGGGGCGTG GTCTACCAGG GCTACAACGC CGTGTTCCCG AGCTTCTATC CGGAGATGTT CCCCACGCGC ACCCGCGTCT CGGGCATGGC GATCTCGCAG AACATCGGCA CCGCGATCAC CGCGCTGCTG CCCGCGCTGT TCGTGGCGGT CGCGCCTCCC GGCGCCGCCA ACATCCCGCT GACCGTCGGC GCCATCACGC TGGCGATCTG CGCCATTGCC GCGGTCTCGG CCCTGAGCGC ACGCGAAACC TACCGCGTGC ACATGAACGA CCTGGGCAAG CCCGATGCGG TGCCGGTCGA CAAGCTCGAG TACGACCGGC TGCGCGAAGA GACGCTCGCC ACCGCACGCA TCGCCAAGGC AGCGGCCTGA
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Protein sequence | MATITAHEPK GKHQSKKATA SGWIGSALEY YDFFIYATAA ALIFPQIFFP KGDPQIAIIA SLATYGVGYV ARPIGALLLG HWGDTHGRKT VLILCMFLMG FSTVAVGLLP TYDQVGLWAP ALLVLLRLIQ GFAVAGEISG ASSMILEHAP FGRRGFFASF TLQGVQAGQI MAAAVFLPLA HYMDKDAFNA WGWRIPFLLS FIVIVAGYII RREVEETPAF AEVEKSAQVP KAPVIQAVTE SWGDMLRVLL CSLMNVIPVV ATIFGAAYAV QPGYGINFEK DIYLWIPVMG NILAVIVIPF VGNLSDKVGR RLPIAVGAIG SGLLSFGYLY AISIHNVPLA IVMSLLMWGV VYQGYNAVFP SFYPEMFPTR TRVSGMAISQ NIGTAITALL PALFVAVAPP GAANIPLTVG AITLAICAIA AVSALSARET YRVHMNDLGK PDAVPVDKLE YDRLREETLA TARIAKAAA
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