| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3315 |
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| Symbol | |
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| ID | 7973711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3493590 |
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| End bp | 3494801 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793900 |
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| Product | protein of unknown function DUF1501 |
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| Protein accession | YP_002945199 |
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| Protein GI | 239816289 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGCC GAGAACTGCT CAAGCTCATG GCCGCCGTTC CGTTCGCGGG CGCCGCCGGC
CGGCTGATGG CCGCGCCCGC GGCCGAAGGC GCCAAGCTGC TGGTGGTGTT TCTGCGCGGC
GCCTACGACT GCGCCAGCCT GCTCGTGCCC ACGGACAGCG ACTTCTACTA CGCCTCGCGC
CCCAACATCG CCATTGCCCG GCCCGGCATG CCCGGCGGCG CGCTGCCGCT GGACGGCAGC
TGGGGCCTGC ACCCCGCGCT GGCACAAAGC CTGATGCCGA TGTTCGAGCA GAAGCAGGCT
TCCTTCATCG CCTTCGCCGG CACCGACGAC CTCACGCGCA GCCACTTCGA GACGCAGGAC
TCGATCGAGC TGGGCCAGGC GCTCGACAAG CGCCGCGACT ATGGCTCGGG CTTTCTCAAC
CGCCTGGCCT CCGTGCTCGG TGCCGGGCCG CTGGCCGGCG TGTCGCCCAT GGCGTTCACC
AACCAGCTGC CGATCGCGAT GCGCGGCAGC GCCAAGGCCG CCAACATGGC GCTCGCGGGC
AGCGCGCGTC CCTCGATCGA TGCACGCCAG AGCGAGGTGA TTTCGGCGAT GTACCGCAAC
ACGGCGCTGG CACAGCCGGT GGCCGAGGGC TTCCAGGTGC GCGACGACGT GGTGCGCGCC
ATGCAGGCCG AGATGGACGC GGCCAGCCGC AACGCCATGA CGGCCAAGGG CTTCGAACTC
GTCGCGCGCC GCATGGCGCG GCTCATGCGC GAGCGCTTCG ACCTCGGCTT TGTCGACGTC
GGCGGCTGGG ACACGCACGT GGGGCAGGGC GGCGCCACCG GCTACCTTGC CAACCGCTTC
GAGGAACTGG GCCGCGGCGT GGCCGGCTTC GCAGAGGAGA TGGGCGACGA CGCCTGGCGC
CAGACCGTGG TCGTGGTCAT CAGCGAGTTC GGCCGCACCT TCCGCGAGAA CGGCAACCGC
GGCACCGACC ACGGGCACGG CAGCGTGTAC TGGGTGCTCG GCGGCGGACT CTCGGCGCAG
GCCGGCGGGC GCATCGTGGG CGAGCAGCAG GAAGTGGCGC AGGCCACGCT GTTCCAGAAC
CGCGACTACC CGGTGCTCAA CGAATACCGC GCGGTGTTCG GCGGGCTGTT CAGGCGCATG
TACGGCCTTT CGCCGGCACA GCTCGCGCGG GTGTTCGACG GGGTGGCGCC GAAGGATCTG
CAGTTGATCT AG
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| Protein sequence | MQRRELLKLM AAVPFAGAAG RLMAAPAAEG AKLLVVFLRG AYDCASLLVP TDSDFYYASR
PNIAIARPGM PGGALPLDGS WGLHPALAQS LMPMFEQKQA SFIAFAGTDD LTRSHFETQD
SIELGQALDK RRDYGSGFLN RLASVLGAGP LAGVSPMAFT NQLPIAMRGS AKAANMALAG
SARPSIDARQ SEVISAMYRN TALAQPVAEG FQVRDDVVRA MQAEMDAASR NAMTAKGFEL
VARRMARLMR ERFDLGFVDV GGWDTHVGQG GATGYLANRF EELGRGVAGF AEEMGDDAWR
QTVVVVISEF GRTFRENGNR GTDHGHGSVY WVLGGGLSAQ AGGRIVGEQQ EVAQATLFQN
RDYPVLNEYR AVFGGLFRRM YGLSPAQLAR VFDGVAPKDL QLI
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