| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3313 |
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| Symbol | |
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| ID | 7973709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3491870 |
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| End bp | 3492793 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644793898 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_002945197 |
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| Protein GI | 239816287 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCGG CGGCCAAACA GTCTCCCTGC ATAGACACGA CTGCCAGGAA GAAGGTGGGG
TTCATCGGGC TGGGCGCGAT GGGCCGCGGC GCCGTCGGCA ACCTGATTGC AAAGGGCTTC
GACGTGGTGG GTTGCGACGT ACGTCCCGAA GCACTCGAGT GGCTGCAAGC GCAAGGCGGC
ATTCCAGCAA GCTCGCTTGC CGAGATGGCC GGCCAGGTCA GCGTGGTGGT GTGCTTCGTC
GTCAATTCGC GGCAGACCGA AACCATGCTC TTTGGCGACA ACGGCCTGGT CGGGAAGCTG
GCGGCCGGAA CCGTGTTCAT CACTTGCAGC ACCATGGATC CAGGCTATGT TCGTGCGCTT
GAAGGGCGGC TGGCGCAGCA CTCGATCTGG CTGGTCGATG CGCCGGTCAC GGGGGGCGCC
GTCGGCGCGG AACGCGGACA ACTGACAATC ATGGGTTCCG GAAAGCGCGA GGCCTTCGAG
CTTGCGCGTC CTGTGCTCGA GACCTTCGGC ACCCGCGTGC ACTACCTGGG CGCGGCTGGC
TGCGGTGCGC AGATGAAAAT TCTCAACCAG CTGCTCTGCG GCGTCCATCT GGCTGCGGCG
GGAGAAGCGC TCGCACTCGC AAGGCGCCAG GGGCTGCCGC TGGATCTCAC GCTGGAGATT
CTCTGCAGCG GAGCGGCCGG GTCCTGGATG CTCGCGGACC GGGGCCCCAG GATGATCGCG
GGCAAGTTCG ACGACATTAC GTCGGCGGTC GATATCTTCG TCAAGGACAT GTCCCTGGTG
CTCGACGCGA CGCGCGAATC GCGATTTCCT GCCGCGCTCG CACATGCTGC ATACCTCGCC
TTTCTCGGCA CCGCGGCGCG GGGACTTGGT GCGCAAGACG ACTCCGCCGT GACAACAGCC
TACGAAGTCG CCACGAAGTC ATGA
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| Protein sequence | MSPAAKQSPC IDTTARKKVG FIGLGAMGRG AVGNLIAKGF DVVGCDVRPE ALEWLQAQGG
IPASSLAEMA GQVSVVVCFV VNSRQTETML FGDNGLVGKL AAGTVFITCS TMDPGYVRAL
EGRLAQHSIW LVDAPVTGGA VGAERGQLTI MGSGKREAFE LARPVLETFG TRVHYLGAAG
CGAQMKILNQ LLCGVHLAAA GEALALARRQ GLPLDLTLEI LCSGAAGSWM LADRGPRMIA
GKFDDITSAV DIFVKDMSLV LDATRESRFP AALAHAAYLA FLGTAARGLG AQDDSAVTTA
YEVATKS
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