| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3312 |
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| Symbol | |
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| ID | 7973708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3490875 |
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| End bp | 3491873 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644793897 |
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| Product | Transketolase central region |
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| Protein accession | YP_002945196 |
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| Protein GI | 239816286 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACCA CCACCGAAAA GAAGCCGAGG CTCACGACCT CCGCGATGAT CGCCTCCATC
GCCAGCGAAG GCCAGCGCGT GACAGCGGCG CCGTTCGGCA AAGCCCTGGT CGAGTTGGGC
CGCAGCCGTC CGGAGATCGT CGGGATGACG GCCGACCTTG CCAAGTACAC CGACCTGCAC
CTGTTCGCGA AGGAGTATCC CGAGCGGTTC TTCCAGATGG GCATGGCCGA GCAGTTGCTG
ATGGCGGCCG CGGGTGGCAT GGCCAAGGAA GGATTCATTC CCTTTGCGAC GACGTACGCC
GTCTTCGGCA CCCGCCGGGC CTACGACTTC GTGCATCAGG TGATTGCGGA AGAGAACCTC
AACGTCAAGA TGTGCTGCGC GCTGCCGGGG CTGACCACCG GCTATGGACC GAGCCACCAG
GCCACCGAAG ACCTGGCATT GATGCGCGGC ATCCCGGGCC TGACGATCAT CGACCCTTGC
GACGCGCTCG ATATCGAGCA GGCCGTACCC CAGATGGCCG ACCATCAGGG CCCCGTCTAT
ATGCGGTTGC CGCGCGGCAA TGTGCCGCGC GTATTGGACG AGTACGACTA CAAGTTCGAA
CTCGGCAAGG CCAAGCTGAT TCGCGACGGA AAAAGCGTAC TGGTGATCGC CAGCGGCTTC
ATGACGATGC GCTCGCTCGA GGTCGCCGAG CAACTCAGGA ATGACGGCGT CGATATTGCC
GTGCTGCACG TGCCCACGAT CAAGCCGCTG GATGAGGCAA CGATCCTTGC CGAAGTCCGG
CGGCTGGGCC GGCTGGTCGT GGTGGCGGAG AACCATTCGG TGATCGGCGG CCTTGGCGAG
GCGGTGGCGG GCCTCCTGAT GCGCTCGGGA GTCTCGACGG CCTATCGCCA GATCGGCTTG
CCCGATGCGT TCCTCGACGC GGGCGCCCTG CCGACACTGC ATGACCGCTA CGGCATCTCG
GCGCAGATGA TGAGCCGGCA GATCAAGGGC TGGGTATGA
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| Protein sequence | MSTTTEKKPR LTTSAMIASI ASEGQRVTAA PFGKALVELG RSRPEIVGMT ADLAKYTDLH
LFAKEYPERF FQMGMAEQLL MAAAGGMAKE GFIPFATTYA VFGTRRAYDF VHQVIAEENL
NVKMCCALPG LTTGYGPSHQ ATEDLALMRG IPGLTIIDPC DALDIEQAVP QMADHQGPVY
MRLPRGNVPR VLDEYDYKFE LGKAKLIRDG KSVLVIASGF MTMRSLEVAE QLRNDGVDIA
VLHVPTIKPL DEATILAEVR RLGRLVVVAE NHSVIGGLGE AVAGLLMRSG VSTAYRQIGL
PDAFLDAGAL PTLHDRYGIS AQMMSRQIKG WV
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