| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3311 |
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| Symbol | |
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| ID | 7973707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3490036 |
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| End bp | 3490875 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644793896 |
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| Product | Transketolase domain protein |
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| Protein accession | YP_002945195 |
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| Protein GI | 239816285 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTGACT TATCAACGCT TCAACAAAGC GCCCGCCGCA TTCGCGCCTA CGCACTGCGC
ATGGGCGAAG TGCAAGGACA GGGCTATATC GGCCAGGCGC TCGGGTGGGC CGACGTCCTT
GCGGTGGCCT ACAAGCACGC GCTGGCGTAC AGGCCGGAGG AGCCGAAGTG GGAAGGCCGC
GACCGCTTCC TCCTGTCCCA CGGCCACTAT GCGATTGCCT TCTACGCGGC ACTGATCGAG
GCCGGGATCA TTCCCGAGGA AGAGCTCGAA ACCTACGGCA GCGACGACAG CCGGCTGCCG
ATGTCCGGCA TGGCCACCTA CACGCCGGGC ATGGAAATGT CCGGCGGCTC GCTCGGGCAA
GGCCTTCCGA TTGCCGTCGG CATGGCGCTG GGGCTGCGTC TGAAGAACAA CCCGGCCTTC
GTCTACAACT CGATGTCGGA CGGAGAACTG GACGAGGGAT CGACCTGGGA GGCTGCGATG
GGCGCCGCGC ACCACCGCCT GCCCAACCTG ATCTGCCTGG TCGATATCAA CAACCAGCAG
GCCGATGGCC CGTCCGGAAA GATCATGGGC TTCGAGCCGC TCGCCGCCAA ATGGGAAGCG
TTCGGCTGGC ACGTGCAGCG CGTCGATGGC AACGACCTGC CGGCCGTCAT GGCTGCCTTC
GATGCCGCGC GCGCACTGAA GGAAGAAAAG CCGCGCGTCA TCTTGTTCGA CACATTGATG
GGACGGGGCG TCCCCTTCCT CGAGACGCGG GACAAGAACC ATTTCATCCG CGTCGACCCG
CCGGAATGGC AGCAAGCCAT CGCCCATGTC GACAGCGCGC AATCCGAAGG AGCCCTGTGA
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| Protein sequence | MSDLSTLQQS ARRIRAYALR MGEVQGQGYI GQALGWADVL AVAYKHALAY RPEEPKWEGR
DRFLLSHGHY AIAFYAALIE AGIIPEEELE TYGSDDSRLP MSGMATYTPG MEMSGGSLGQ
GLPIAVGMAL GLRLKNNPAF VYNSMSDGEL DEGSTWEAAM GAAHHRLPNL ICLVDINNQQ
ADGPSGKIMG FEPLAAKWEA FGWHVQRVDG NDLPAVMAAF DAARALKEEK PRVILFDTLM
GRGVPFLETR DKNHFIRVDP PEWQQAIAHV DSAQSEGAL
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