| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3299 |
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| Symbol | |
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| ID | 7973695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3476656 |
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| End bp | 3477834 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793884 |
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| Product | glycine cleavage system T protein |
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| Protein accession | YP_002945183 |
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| Protein GI | 239816273 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGCTT CCTCCGATTC CTCTTCCGCC GAACAACTCC TGAAGACCCC GCTGTACGGC
CTGCACGTGG AGCTCGGTGC CCGCATGGTG CCCTTTGCAG GCTATTCGAT GCCGGTGCAA
TACCCCGCCG GCCTCATGGC CGAGCACAGG CACACGCGCA ACGCCGCCGG CCTGTTCGAC
ATCTCGCACA TGGGCCAGCT GCGCCTGGTC GGACCGGACG CCGCGGCCGC CTTTGAAACC
CTGATGCCGG TCGACGTGAT CGACCTTGCG CCCGGCAAGC AGCGCTACGG GCTGCTGCTG
AACGACGAGG GCGGCATCCT CGACGACCTG ATGTTCTTCA ACGAAGGCCA CGGCTCGATC
TTCGTGATCG TCAACGGCGC CTGCAAGGTG GCGGACATCG CCCACATCCA GCAGAAGATC
GGCGCACGCT GCGATGTGCA GCCCATGCCC GACCACGCGC TGCTCGCGCT GCAGGGCCCG
CAGGCGGCCG CGGTGCTGGC GCGGCTGTCG CCGGGCATCG AGCGCTTCGT GTTCATGACC
GGCGGCGCGG TGCAGATCGG CGGCATTCCG GCCTTTGCCA CGCGCAGCGG CTACACCGGC
GAAGACGGCT TCGAGATCTC GGTGGCCGGC CAGAATGCCG AGGCGCTGGC CCGCCTGCTG
CTGGCCCAGC CCGAGGTCGA GCCCATTGGC CTGGGCGCGC GCAATTCGCT GCGGCTGGAA
GCGGGGCTGT GCCTCTACGG CAACGACATC GACACCACCA CCACGCCGGT CGAGGCCTCG
CTCAACTGGG CGATCCAGAA GGTGCGCCGC ACCGGCGGCG CGCGCGAAGG CGGCTTTCCG
GGCGCGGCCC GGGTGCTGGC CCAGCTCGCC GCCGCCACGG CCGGCGCCGC GGGCCACACC
GACCACGACA CGCTGAAGCG CAAGCGCGTC GGCCTCGTGG CGCTGGAACG CGTTCCGGTG
CGCGACGGCA CGGTGCTGCA GTCCTTCGAA GGCAAGGACA TCGGCTTTGT CACGAGCGGC
CTGCTCGGCC CGACGGCCGA CCGCCCGATC GCCATGGGCT ACGTGGCCAC CGCGTATTCC
GAGCCCGGCA CGCGCGTGCA GGCCATCGTG CGCGGCAAGC CGGTGCCGAT GGAAGTCTCG
ACGCTGCCTT TCGTGCCGAC GCGCTACTAC CGCGGCTAG
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| Protein sequence | MAASSDSSSA EQLLKTPLYG LHVELGARMV PFAGYSMPVQ YPAGLMAEHR HTRNAAGLFD
ISHMGQLRLV GPDAAAAFET LMPVDVIDLA PGKQRYGLLL NDEGGILDDL MFFNEGHGSI
FVIVNGACKV ADIAHIQQKI GARCDVQPMP DHALLALQGP QAAAVLARLS PGIERFVFMT
GGAVQIGGIP AFATRSGYTG EDGFEISVAG QNAEALARLL LAQPEVEPIG LGARNSLRLE
AGLCLYGNDI DTTTTPVEAS LNWAIQKVRR TGGAREGGFP GAARVLAQLA AATAGAAGHT
DHDTLKRKRV GLVALERVPV RDGTVLQSFE GKDIGFVTSG LLGPTADRPI AMGYVATAYS
EPGTRVQAIV RGKPVPMEVS TLPFVPTRYY RG
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