| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3293 |
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| Symbol | |
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| ID | 7973689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3470869 |
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| End bp | 3471774 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793878 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002945177 |
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| Protein GI | 239816267 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.563306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTTGC GATTCGTCGA AGCCTTCCAC TGGGCCGTGG CACTCAAGAG CGTCACCCGT
GCGGCCGAGA AGCTGCACCT CACGCAGTCG GCGCTGTCCA GCCGCATTGC CGCGCTCGAG
CGCGAGTTGG GCGTGCTGCT GCTCGACCGG CGCGACAAGC AGTTCCGCCT CACGGTGGCA
GGGCAGCGCT TCCATGCCTT CGCGCAGAAG CTGCTCGAGA TGCAGATGCA CATCAAGGCC
GAGATGGGCT CGGGCGCGGT GCGCGAGGCG GTGCTGCGCG TGGGCGCCAT CGAGTCGGTG
GTGCACAGCT GGCTCACGGG CTGGCTCAAG CACATGCAGG CCACGCATCC GGACTTCGAA
CTGGAGCTCA CCGTCGAAAC CACGCCGGTG CTGGTCGACC AACTGCAGCG CGGCAAGCAG
GACCTGGTGT TTGGCGCGCT GCCGGCCACC GGCGACGGCG TGCGCACGCG GGCCGTGCCG
CCGATGCCGA TGTGCTTCGT CGGCCACCGC GAGCTGCACC TGAAGCGGCG CTACCGCCTG
CCGGACCTGC TCTCGCTCGA CCTCCTGACC TTCCAGCGCG GCTCGCAGCC GCACGTGGCG
CTGCTCGAGC TGTTCCGCGA GGCCGGCAGC CCGCCGCCGC GGGTGCATGC GATCTCGTCG
ATCTCGGCGA TGGCGCAGCT GGTGGAGGCG GGCTTCGGCG TGGCCGGGCT GCCGCGCGCG
GTGGTCGAGC CGCTGGCGCG GCGCCTGCCG CTGCGCGTGC TGCCTTGCGA CGTGACGCTG
GAGCCGCTGC CCATCTATGC GAGCTACCGC GACGACCCCT CGTCGCCGCT GCCCGAGGCC
GCGCTCGGCT CCGCCGTGGT GCACGCTTCG CACCGCATGG GTTCATCGAA AAAATCGATG
GGTTGA
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| Protein sequence | MNLRFVEAFH WAVALKSVTR AAEKLHLTQS ALSSRIAALE RELGVLLLDR RDKQFRLTVA
GQRFHAFAQK LLEMQMHIKA EMGSGAVREA VLRVGAIESV VHSWLTGWLK HMQATHPDFE
LELTVETTPV LVDQLQRGKQ DLVFGALPAT GDGVRTRAVP PMPMCFVGHR ELHLKRRYRL
PDLLSLDLLT FQRGSQPHVA LLELFREAGS PPPRVHAISS ISAMAQLVEA GFGVAGLPRA
VVEPLARRLP LRVLPCDVTL EPLPIYASYR DDPSSPLPEA ALGSAVVHAS HRMGSSKKSM
G
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