| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3290 |
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| Symbol | |
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| ID | 7973686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3464938 |
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| End bp | 3468591 |
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| Gene Length | 3654 bp |
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| Protein Length | 1217 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793875 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_002945174 |
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| Protein GI | 239816264 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGC ATTCCCTTCT CCCGTCCCGC TGGCAGTTCT GGATCGACCG CGGCGGCACC
TTCACCGACC TGGTCGGCCG CGATCCCGAG GGCGGCCTGC ACACGCTCAA GCTGCTGTCG
GAGAACCCCG AGCAGTACAA GGACGCCGCC GTCGAAGGCA TCCGCCGCCT GCTGAAGCTC
GCGCCCGGCG AGGCCGTGAC CCCCGAGCGC GTCGAGTGCG TGAAGATGGG CACCACGGTG
GCCACCAACG CGCTGCTGGA ACGCAAGGGC GAGCCGACGG TGCTGGTCGC CACGGCCGGC
TTTCGCGATG CACTGCGCAT TGCCACGCAG GCGCGGCCAC GGCTCTTCGA CCGCCGCATC
GTGCTGCCCG AGCTGCTCTA CCAGCGCGTG ATCGAGGCCG GCGAGCGCAT GGATGCGCAG
GGCGGCGTCG TGCAGCCGCT GGACGAGCCC GCGCTGCGCG CCGCGCTGCA GGAAGCCTTC
GATGCCGGCC TGCGCGCCTG CGCCATCGTC TTCATGCACG GCTGGCGCTA CGCCGCGCAC
GAACTCGCGG CCGAGCGCAT CGCGCGCGCC ATCGGTTTCA CGCAGGTGTC GGTGTCGCAC
AAGACCAGCC CGCTCATGAA GCTGGTGCCG CGCGGCGACA CCACGGTGGT CGACGCCTAC
CTGAGCCCGA TTCTGCGGCG CTACGTGGAG CAGGTGTCGC GCCAGATGCC GGGCGTGCCG
CTGTTCTTCA TGCAGAGTTC GGGCGGGCTC ACGCAGGCCG ACCGCTTCCA GGGCAAGGAC
GCGATTCTCT CGGGCCCGGC CGGCGGCATC GTCGGCATGG TGCGCACCGC GCTCGACGCC
GGCCATCCGC GCGTGATCGG CTTCGACATG GGCGGCACTT CCACCGACGT GTCGCACTAC
GCCGGCGAGT TCGAGCGCTC CTTCGAAACC CAGGTGGCCG GCGTGCGCAT GCGCGCGCCG
ATGATGAGCA TCCACACCGT GGCTGCGGGC GGCGGCTCGG TCATTGCCTT CGACGGCGCG
CGGCTGCGCG TGGGGCCGGA GTCGGCCGGC GCCAACCCGG GGCCGGCCAG CTACCGGCGC
GGCGGTCCGC TCACCACCAC CGATGCGAAC GTGCTGCTCG GCAAGATCCA GCCCTCGCAT
TTTCCGCATG TCTTCGGGCC GAACGCCGAT GAAGCGCTCG ACCTCGCGGC CGCGCGGCGC
GGCTTCGAAG CCATGGCGCG CCGCATGGCG GAAGCCACGG GCCGCACCGT GGGTGCCGAA
GAAGTGGCGA GCGGTGCGCT GCGCATCGCC GTGGCCAGCA TGGCCAATGC CATCAAGCGC
ATTTCGGTGG CGCGTGGCTA CGACGTCACG CAATACACGC TGCAGTGCTT CGGCGGCGCA
GGCGGCCAGC ACGCCTGCCT GGTGGCCGAT GCACTGGGCA TGCGCAGCGT CTACCTGCAT
CCGCTCGCGG GCGTGCTCTC GGCCTTCGGC ATGGGGCTGG CCGACCAGCT CGCGATGCGC
GAGCTGGCGC TGGAACGCCG GCTCGATGCG CAGGGGCTGG CCGCGGCGCG CGATGCGGCA
GCCACTCTTG CGGCGCAGGC CAAAGGAGAA CTGTGCGAGC AGGGCGTGGC CGATGCGGCC
ATTGCCACGG TGCACCGCGT GCAGCTGCGC TACGAAGGCA CCGACACCGC GCTGGCCTGC
GCGCTGCCGA TGGCGGGTTC GGCCGACGAC GCGATCGCGG CGATGCGGAG CGAGTTCGAG
GCCAGCTATC GCCGCCGCTT CGCCTTCCTG ATGGCCGAGC GGGCGCTCGT GATCGAGGCC
GTGACGGTCG AAGCGGTGGG CACTGGCGAG CGCGCAGCGC CCGCAGCCGC ACAGGCCGAT
GCGGCCAGTC ATGCACCCGA ACCGCTCGCG GCCGTGCGCA TGTACTGCGA GGCTGACGAA
AAAGCCGCAG GCTGGCGCGA TGCCGCGCTG TTCGACGAAG CGGCGCTCAA GCCCGGCGCT
TCCATCGACG GCCCCGCCAT CCTCGCGGGC CGCAACGCCA CCACGGTGAT CGAGCCCGGC
TGGCAGGCGC GCGCCACCAC GGCCGGCATC CAGCTGCACC GCGTGCGCCC GCGCGTCGCC
ACGCAGGCCC TGGGCACCAG CGCCGATCCG GTGATGCTCG AGGTGTTCAA CAACCTCTTC
ATGAACATCG CCGAGCAGAT GGGCCTGCGG CTGCAGAACA CCGCCTATTC GGTCAACATC
AAGGAGCGGC TCGACTTCTC CTGCGCGCTG TTCGACGTCG AGGGCAACCT GATCGCCAAC
GCGCCGCACA TGCCGGTGCA CCTGGGCTCG ATGAGCGAGT CGATCAAGAC CGTGATCGAC
GGCAACCCCG GCATGAAGCC CGGCGACGTC TTCGTGCTGA ACGACCCCTA CCACGGCGGC
ACGCACCTGC CCGACATCAC GGTGGTCACG CCGGTGTACC TGGAGTCGGG CGACGCACGG
CCGTCGTTCT ACGTGGCTTC GCGCGGCCAC CATGCCGACG TGGGCGGCAT CACGCCGGGC
TCGATGCCGC CGTTCTCGGC CACCATCGGC GACGAGGGCG TGCTGATCGA CAACTTCAAG
CTGGTGGAGG GCGGGCGCCT CTGCGAAGCC GAACTGCGCG CGCTGCTCGG AAGCGGCGCC
CACCCGTCGC GCAACATCGA GCAGAACCTG GCCGACCTGC GCGCGCAGAT CGCCGCCAAC
GAAAAGGGCG TGCAGGAGCT CCAGGCCATG GTCGCCCAGT TCGGCCGCGA GACGGTGGCG
GCCTACATGG GCCACGTGCA GGACAACGCC GAGGAGTCGG TGCGCCGCGT CATCACGGCG
CTGAAGAACG GCGAGTTCAC GCTGCCGCTG GACAACGGCG CGCAGATCCG CGTGCGGGTC
ACGGTGGATG CCGTCGCGCG CTCGGCCACG GTCGACTTCA CGGGCACCAG CGCGCAGCTG
GCCAACAACT TCAATGCGCC GCGGGCCATC ACCATGGCGG CCGTGCTGTA TGTGTTCCGC
ACGCTGGTGG ACGACGACAT TCCGCTCAAC GCGGGCTGCC TCAAGCCCAT CGAGGTGATC
GTGCCGGGCG GCTGCATGCT CAACCCGCTG CCGCCGGCCG CGGTGGTGGC GGGCAACGTC
GAAACCTCGA GCTGCGTGAC CAATGCGCTC TACGGCGCGC TGGGCGTGAT GGCCGCGAGC
CAGTGCACGA TGAACAACTT CACCTTCGGC GACGGCGAGC ACCAGTACTA CGAAACCATC
TCGGGCGGCT CGGGCGCGGG CCCGGGCTTC GACGGCACGA GCGTGGTGCA GACCCACATG
ACCAACTCGC GCCTCACGGA CCCCGAGGTG CTGGAGTTCC GCTACCCGGT GCGCCTTGAG
AGCTACCGCC TGCGCACCGG TTCAGGGGGA GCCGGGCGCT GGCGCGGCGG CGACGGCGGC
GTGCGGCGCG TGCGCTTCCT GGCGCCGATG ACGGCGTCGA TCCTCAGCAA TGGCCGGCTC
TACGGCGCAT TCGGCGGTGC GGGTGGGGAG GCTGGCGCGG TGGGTGTCAA CCGTGTCGAG
CGGGTCGACG GGACGGTCGA GACGTTGGAC CACATCGGAC AGGTGCAGAT GGCGCCGGGG
GACGTGTTCG TGATCGAAAC GCCGGGTGGG GGAGGATGGG GCGAAGGGCG CTGA
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| Protein sequence | MTTHSLLPSR WQFWIDRGGT FTDLVGRDPE GGLHTLKLLS ENPEQYKDAA VEGIRRLLKL
APGEAVTPER VECVKMGTTV ATNALLERKG EPTVLVATAG FRDALRIATQ ARPRLFDRRI
VLPELLYQRV IEAGERMDAQ GGVVQPLDEP ALRAALQEAF DAGLRACAIV FMHGWRYAAH
ELAAERIARA IGFTQVSVSH KTSPLMKLVP RGDTTVVDAY LSPILRRYVE QVSRQMPGVP
LFFMQSSGGL TQADRFQGKD AILSGPAGGI VGMVRTALDA GHPRVIGFDM GGTSTDVSHY
AGEFERSFET QVAGVRMRAP MMSIHTVAAG GGSVIAFDGA RLRVGPESAG ANPGPASYRR
GGPLTTTDAN VLLGKIQPSH FPHVFGPNAD EALDLAAARR GFEAMARRMA EATGRTVGAE
EVASGALRIA VASMANAIKR ISVARGYDVT QYTLQCFGGA GGQHACLVAD ALGMRSVYLH
PLAGVLSAFG MGLADQLAMR ELALERRLDA QGLAAARDAA ATLAAQAKGE LCEQGVADAA
IATVHRVQLR YEGTDTALAC ALPMAGSADD AIAAMRSEFE ASYRRRFAFL MAERALVIEA
VTVEAVGTGE RAAPAAAQAD AASHAPEPLA AVRMYCEADE KAAGWRDAAL FDEAALKPGA
SIDGPAILAG RNATTVIEPG WQARATTAGI QLHRVRPRVA TQALGTSADP VMLEVFNNLF
MNIAEQMGLR LQNTAYSVNI KERLDFSCAL FDVEGNLIAN APHMPVHLGS MSESIKTVID
GNPGMKPGDV FVLNDPYHGG THLPDITVVT PVYLESGDAR PSFYVASRGH HADVGGITPG
SMPPFSATIG DEGVLIDNFK LVEGGRLCEA ELRALLGSGA HPSRNIEQNL ADLRAQIAAN
EKGVQELQAM VAQFGRETVA AYMGHVQDNA EESVRRVITA LKNGEFTLPL DNGAQIRVRV
TVDAVARSAT VDFTGTSAQL ANNFNAPRAI TMAAVLYVFR TLVDDDIPLN AGCLKPIEVI
VPGGCMLNPL PPAAVVAGNV ETSSCVTNAL YGALGVMAAS QCTMNNFTFG DGEHQYYETI
SGGSGAGPGF DGTSVVQTHM TNSRLTDPEV LEFRYPVRLE SYRLRTGSGG AGRWRGGDGG
VRRVRFLAPM TASILSNGRL YGAFGGAGGE AGAVGVNRVE RVDGTVETLD HIGQVQMAPG
DVFVIETPGG GGWGEGR
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