| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3289 |
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| Symbol | |
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| ID | 7973685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3462920 |
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| End bp | 3464623 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793874 |
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| Product | Electron-transferring-flavoprotein dehydrogenase |
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| Protein accession | YP_002945173 |
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| Protein GI | 239816263 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.444122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCACG ACGAAATCCT CGCCCAGTTC GGCCCCCGCG AATCCATGGA ATATGACGTG
GTGGTCGTCG GCGGCGGCCC GGCCGGCCTC TCGACCGCCA TCCGGCTCAA GCAGCTGGCG
GCCCAGCACG ACAAGGAAAT CTCGGTGGTG GTGCTCGAGA AGGGCTCCGA GCCCGGCGCG
CACATTCTCT CGGGCGCCAT CATGGACCCG CGCGCGCTCA ACGAGCTGCT GCCCGACTGG
AAGGAGCTGG GCGCCCCGCT GAACCAGCCC GTGACCGACG ACGCCATGGT GTTCCTCGGC
GAAAAATCGG GCCTGCGCAC GCCCAACCTG TTCCTTCCGG CCTGCTTCCA GAACCACGGC
AACTACATCA TCAGCCTGGG CGCCTTCACC AAGTGGCTGG CGCAGCAGGC CGAGAACCTG
GGCGTGGAGA TCTTTCCGGG CTTCCCGGCG GCCGAAGTGC TCTACAACGA GAACGGCTCG
GTGCGCGGCG TGGCCACCGG CAACATGGGC GTGGGCAAGG ACGGCGAACC CACCGAGAAC
TTCCAGCTCG GCATGGAGCT CTTGGGCAAG TACACGGTAT TTGCCGAGGG CGCGCGCGGC
CACCTGGGCC GCCAGCTGAT CGCCAGATTC AAGCTCGACG AGGGCAAGGA TCCGCAGACC
TACGGCCTGG GCGTGAAGGA AGTATGGGAA ATCGACCCCA AGCGCCACCA GCCCGGCTTC
GTGCTGCACA CGGCCGGCTG GCCGATGAAG AGCGACACCT ACGGCGGCGC CTTCCTCTAT
CACATGGAGG ACAACAAGGT CACGATGGGC TTCATCACGG GCCTGGACTA CAGCAACCCG
TACCTGAGCC CGTTCGAGGA AATGCAGCGC TGGAAGCTGC ACCCCAACAT CCGCTGGTAC
CTCGAAGGCG ACGAGGCCCA GGGCATCAAG CCGGCCAAGC GCATCGGCTA CGGCGCGCGC
GCCATCACGG CCGGCGGCCT GATGTCGCTG CCCAAGACGG TGTTCCCGGG CGGCGCGCTG
GTCGGCTGCG AGGCCGGCTA CCTGAACGTG AGCCGCATCA AGGGCAGCCA TGCCGCCATC
AAGACCGGCA TGCTGGCCGC CGAAGCGGCC TTCGTCGCGG TGCAGGCCGG CCGCCAGCAC
GACGAGCTCA CGGCCTACCC GGCGGCGTTC GAGAAGAGCT GGCTCCACGC GGAACTGAAC
AAGTCACGCA ACTTCAAGGC CTGGTTCAAG AAGGGGCTGG GCATTGCCAC CTTCATGAAC
GGCATCGAGC AGTGGCTGCT CAAGGGCCAC ATTCCATGGA CCCTGCGCCG CAACAAGCCG
GACCACCTGT ACCTCAAGCC GGCGGCGGAG TGCAAGCCCA TCGCCTATCC GAAGCCGGAC
GGAAAGCTGA CCTTCGACCG CCTCTCGAGC GTGTTCATCA GCAACACCAA CCACGAGGAG
CAGCAGCCTG CACACCTGAC GCTCAAGGAT GCGTCGGTGC CGGTGAACAT CAACCTGTCG
AAGTTCGCGG GCCCCGAAAG CCGCTACTGC CCGGCCGGCG TGTACGAGTT CGTGCCCGAC
GAGGCCAACG CCGGCAAGGA GCGCCTGCAG ATCAACGCGC AGAACTGCGT GCACTGCAAG
ACCTGCGACA TCAAGGATCC GACGCAGAAC ATCGTGTGGG TCACGCCTGA AGGGGGCGGC
GGGCCGAATT ACGTGGGGAT GTAG
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| Protein sequence | MTHDEILAQF GPRESMEYDV VVVGGGPAGL STAIRLKQLA AQHDKEISVV VLEKGSEPGA
HILSGAIMDP RALNELLPDW KELGAPLNQP VTDDAMVFLG EKSGLRTPNL FLPACFQNHG
NYIISLGAFT KWLAQQAENL GVEIFPGFPA AEVLYNENGS VRGVATGNMG VGKDGEPTEN
FQLGMELLGK YTVFAEGARG HLGRQLIARF KLDEGKDPQT YGLGVKEVWE IDPKRHQPGF
VLHTAGWPMK SDTYGGAFLY HMEDNKVTMG FITGLDYSNP YLSPFEEMQR WKLHPNIRWY
LEGDEAQGIK PAKRIGYGAR AITAGGLMSL PKTVFPGGAL VGCEAGYLNV SRIKGSHAAI
KTGMLAAEAA FVAVQAGRQH DELTAYPAAF EKSWLHAELN KSRNFKAWFK KGLGIATFMN
GIEQWLLKGH IPWTLRRNKP DHLYLKPAAE CKPIAYPKPD GKLTFDRLSS VFISNTNHEE
QQPAHLTLKD ASVPVNINLS KFAGPESRYC PAGVYEFVPD EANAGKERLQ INAQNCVHCK
TCDIKDPTQN IVWVTPEGGG GPNYVGM
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