| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3286 |
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| Symbol | |
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| ID | 7973682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3460213 |
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| End bp | 3461565 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793871 |
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| Product | histidine kinase |
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| Protein accession | YP_002945170 |
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| Protein GI | 239816260 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00148382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGG CGCTTCCGAA GGACGGCCCC GACACGCTGG CCGGCCGCCT GACGCGCACC
CTGATCCTCT GGGTCGGCGG CGTGTGGATG CTGTGCGTGC TGGCCGTGGT CTGGTATGTG
GACCGCGAGA TCAACCACAA CTTCGACAAC GAACTGGTCG AGGTCTCGCA CCGCATGTTC
GACATGGCGC TGCAGGAATT CGGCAAGATG CAGCATTCAG GCGCCACGCC GGACACGCCG
GTGATCGCGC CCAAGCAGCT GTTCTCCGAG GACGCCGTGA TGTACCAGGT GGTGGACATC
CACGAGCACG TGCTGCTGCG CTCGGCCGAG GCGCCCGACG GCGCCTTCGA CGTGCCACTG
GCTCCCGGCT TCGCCAACAA CCAGACCTGG CGCATCTATA CGGTGCGGCA TCCCACGCTG
GGCCTTTACT TCCAGGTGGC CGATCCGCTC GACGAGCGGC GCTCGGCGCT GAACCGCACG
CTGTTCGGGC TGATCATTCC GCTCGGTGCC GTGCTGCCGC TGCTGGCGCT GGTGCTGCGC
AAGGTGGCGC GCAACGAGCT GCGCGTGCTG CAGCAGCTCG CGGGCGAGAT CGAGAAGCGC
AGCGGCTCCG ACCTGCGCCC CATCACGCTG CCCGGCCTGC CGCGCGAGCT GCGCTCGGTC
GGCGACCACG TCAACAGCCT GCTGGAGCGG CTGTCGCATT CGCTCGACGT CGAACGCGCG
CTGGCCGCCA ACGCGGCGCA CGAGCTGCGG ACCCCGCTGG CCGCGGCGCG GCTGCGGCTG
CAGACCGCGC TCGAGCACGA CCTGCGGCGC AACGACGTGC AGGCGGCGCT CGATGCGCTG
CAGCTGCTCA GCCACCGCGC CGAGAAGCTG CTGCAGCTCT CGCGCGCGGA ATCGGCCGCA
TCGCTCGCGC GCGCGCCGGT CGACCTGGTG CAGCTGGCCG GCGCCGTGGC GCAGGACTTC
TGGAACGACC CGCAGATCAG CGAGCGGCTC GCGCTCAAGG TGCCCGACGA CGCCGCGCCC
ATTGCCTCGG GCGACGTCGA TGCGCTGGCG ATCGCGCTGC GCAACCTGGT GGAAAACGCG
CTGCGCTACG GCGGCAACGG CCGCGTGGTG ATCGAGGTGA TGGCGCCCTG CACGCTCGCG
GTGCGCGACT TCGGCGCGGG CGTCAGCGCC GAACAGCTCG CCACGCTGCA GCAGCGCCAC
GTGCGCCACA GCTCCGATCG CGCAGGCTAC GGCCTGGGGC TGTCGATCGT GGGCACCATC
GTCGAGAAGC ACGGCGCCAG GCTCGAGCTG GCATCGCCGC CGCCGGGTGC GGCCCATGGC
TTCGAGGCGC GCATCGTGCT GCGGCCGGCG TAG
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| Protein sequence | MNAALPKDGP DTLAGRLTRT LILWVGGVWM LCVLAVVWYV DREINHNFDN ELVEVSHRMF
DMALQEFGKM QHSGATPDTP VIAPKQLFSE DAVMYQVVDI HEHVLLRSAE APDGAFDVPL
APGFANNQTW RIYTVRHPTL GLYFQVADPL DERRSALNRT LFGLIIPLGA VLPLLALVLR
KVARNELRVL QQLAGEIEKR SGSDLRPITL PGLPRELRSV GDHVNSLLER LSHSLDVERA
LAANAAHELR TPLAAARLRL QTALEHDLRR NDVQAALDAL QLLSHRAEKL LQLSRAESAA
SLARAPVDLV QLAGAVAQDF WNDPQISERL ALKVPDDAAP IASGDVDALA IALRNLVENA
LRYGGNGRVV IEVMAPCTLA VRDFGAGVSA EQLATLQQRH VRHSSDRAGY GLGLSIVGTI
VEKHGARLEL ASPPPGAAHG FEARIVLRPA
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