| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3275 |
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| Symbol | |
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| ID | 7973671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3448993 |
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| End bp | 3450414 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793860 |
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| Product | ethanolamine transproter |
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| Protein accession | YP_002945159 |
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| Protein GI | 239816249 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00908] ethanolamine permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.245994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCCA CCGCAGTCAC GCCGGTCGCA GCCACTGTTC CCACAGGCAC CGGCCATCTG
AAGAAGGTCC TCGGCCCCAT CCAGCTCTGG GGCATTGCCG TGGGCCTGGT CATCTCGGGC
GAGTACTTTG GTTGGAGCTA CGGCTGGAAC ACTGCCGGCA CGCTCGGCTT CCTGGTGGCC
ACGGTGCTGG TGGCCACGAT GTACACCACC TTCATCTTCA GCTTCACCGA GCTCTCCACC
GCCATTCCGC ATGCGGGCGG CCCGTTTGCC TATGCGCGCC GCGCCTTCGG GCCGACCGGC
GGCTTCGTGG CGGGCTTTGC CACGCTGATC GAATTCGTCT TTGCGCCGCC GGCCATCGCG
CTGGCCATCG GCGCCTACCT CAACGTGCAG TTCCCCGGCA TCAACCCGAA GTGGTTCGCG
CTGGGCGCGT ACGTGATCTT CATCGCGCTC AATTGGATCG GCGTGGGCAT TGCGGCGGCC
TTCGAGCTGT TCGTGACGCT GCTGGCCATT GTCGAGCTGC TGGTGTTCAT GGGCGTGGTC
ACGCCGGGCT GGACCATGGC CAACTTCGTC GCCAACGGCT GGGCCGGCGG CAGCGTGCTC
AACGGCGCGG CCGTCTCGGG CATCTTCGCG TCGATACCGT TCGCGATCTG GTTCTTCCTG
GCCATCGAGG GCGCGGCCAT GGCCGCGGAG GAAGCGCGCG ATCCGCACCG CACCATTCCC
ATCGCCTACA CCACGGGTAT CGTCACGCTG GTGGTGCTGG CCTTCGGCGT GATGATCTTC
GCGGGCGGCG TGGGCGACTG GCGCAAGCTC GCCAACATCA ACGACCCGCT GCCGCAGGCC
ATGAAGGCGG TGGTGGGCGA CAACAGCGGC TGGCTGCATA TGCTGGTGTG GATCGGCCTG
TTTGGGCTGA TCGCCTCGTT CCACGGGATC ATCATGGGCT ACTCGCGCCA GATCTTTGCG
CTGGCGCGCG CCGGCTACCT GCCGCGCTAC TTCGCGGGCC TGAGCCCGCG CTTCGACACG
CCGCACCGCG CGCTGCTGGC CGGCGGTGTG ATCGGCGTGG TGGCCATCTT CAGCGACGAG
TGGGTGCAGT TCGGCGGCCA GACGCTCACC GCCAACATCG TGACCATGGC CGTGCTCGGC
GCCATCGTGA TGTACCTGAT CTCGATGGCC GCGCTGTTCA GGCTGCGCAA GAGCGAGCCC
GGCCTGCTGC GCACCTACCG CGCGCCCTTC TATCCGGTGT TTCCGGCCAT TGCGCTCGGG
CTTGGCGTGG TCTGCCTGGG CGCCATGGTC TGGTTCAACT TCATGCTGAC CGTGCTGTTC
CTGGTGCTGA TGGCAGCGGC CTACGGCTAC TTCCTGCTGA CCTCGGCGCA GCGCAAGGCA
GCGGCGCCCG ACGAGATGCT GTCCTCCCGC ACCATCGCGT GA
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| Protein sequence | MQPTAVTPVA ATVPTGTGHL KKVLGPIQLW GIAVGLVISG EYFGWSYGWN TAGTLGFLVA
TVLVATMYTT FIFSFTELST AIPHAGGPFA YARRAFGPTG GFVAGFATLI EFVFAPPAIA
LAIGAYLNVQ FPGINPKWFA LGAYVIFIAL NWIGVGIAAA FELFVTLLAI VELLVFMGVV
TPGWTMANFV ANGWAGGSVL NGAAVSGIFA SIPFAIWFFL AIEGAAMAAE EARDPHRTIP
IAYTTGIVTL VVLAFGVMIF AGGVGDWRKL ANINDPLPQA MKAVVGDNSG WLHMLVWIGL
FGLIASFHGI IMGYSRQIFA LARAGYLPRY FAGLSPRFDT PHRALLAGGV IGVVAIFSDE
WVQFGGQTLT ANIVTMAVLG AIVMYLISMA ALFRLRKSEP GLLRTYRAPF YPVFPAIALG
LGVVCLGAMV WFNFMLTVLF LVLMAAAYGY FLLTSAQRKA AAPDEMLSSR TIA
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