| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3269 |
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| Symbol | |
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| ID | 7973665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3442147 |
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| End bp | 3443058 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793854 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002945153 |
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| Protein GI | 239816243 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0672409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTCC CCATCAACCC CGCCCGCGTC GACTTCGTCA CGCTGCGCCT GTTCTGCGCC
GTGGCCCAGT CGGGCAGCAT CACCAAGGGC GCCGAGGCCT GCCACCTGGC GCTCTCGGCC
GCCAGCCGGC GGCTGTCGGA CTTCGAGGCC GCCACCGGAT CGAAGCTGCT GGAGCGCAGC
TCGCAAGGCA TCGCGCTGAC CCCGGCCGGC CACGTGGCCA TGCAGCATGC GATGCGGCTG
TTCCAGGGCT TCGAGCAGTT CAGCAACGAG CTCGGCGACT ATTCGAGCGG AGTGCGCGGC
CATGTGCGGC TGTGGGCCAA CATGTCGGCG CTCACCGAGT TCCTGCCGGC CACGCTGGCC
GCCTTCCTCG GCCGGCATCC GGACATCCGC GTCGAAGTGG AGGAGCAGCT GAGCGGCGAC
ATCGTGCGCG CGCTGGTCGA CGGCCTGGCC GACGTGGGCG TGTTCGCCGA GAACACGCCG
GCCTACGGGC TCGACGTGGC GCCGTTCCAG ACCGACGAGC TGGTGGTGCT GTGCGCCCGG
CAGCATCCGC TCGCGCGCAC GCGCCGGACC GATTTCAAGA CCTGCCTCGC GCACGAGTTC
GTGGGGCTGA ACCGCAGCAG CTCGCTGCTA GAGCTCACCT CGCGCGCGGC CGAGCAGGCT
GGCATTCCGA TGCGCCTGCG CGTGCAGGTG CGCAGCTTCG ATGCGATGTG CCACATGATC
GCGGCCAACC TCGGCATCGG CGTGGTGCCG CTCGCAGCCT GCAAGGCGCA GGTGAGCGCG
CTCGGCCTCA AGGTGGTGCG GCTCAGGGAT GCCTGGGCCG TGCGCCGCCT GCTGATGGCC
ACCAAGACCG GCGAGACCTT GTCGCCGGCG GCGCAGCTGC TGGTGGGGCA GCTGATGGCG
TCGTCGACTT GA
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| Protein sequence | MALPINPARV DFVTLRLFCA VAQSGSITKG AEACHLALSA ASRRLSDFEA ATGSKLLERS
SQGIALTPAG HVAMQHAMRL FQGFEQFSNE LGDYSSGVRG HVRLWANMSA LTEFLPATLA
AFLGRHPDIR VEVEEQLSGD IVRALVDGLA DVGVFAENTP AYGLDVAPFQ TDELVVLCAR
QHPLARTRRT DFKTCLAHEF VGLNRSSSLL ELTSRAAEQA GIPMRLRVQV RSFDAMCHMI
AANLGIGVVP LAACKAQVSA LGLKVVRLRD AWAVRRLLMA TKTGETLSPA AQLLVGQLMA
SST
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