| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3267 |
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| Symbol | |
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| ID | 7973663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3439883 |
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| End bp | 3440866 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793852 |
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| Product | pyruvate carboxyltransferase |
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| Protein accession | YP_002945151 |
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| Protein GI | 239816241 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.705038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAG GCAAGGGCAA GCGGCTCTTC ATCAACGAAG TGGCCACGCG CGACGGCTTC
CAGATGGAGA GCCGCTTCAT TCCCACCGAC GACAAGATCG CGCTGATCGA CCGCCTCGGC
ACGCTCGGCT ACGCCAAGAT CGAGGTGACC TCGTTCACCT CCGCCAAGGC GATCCCGGCG
CTGCGCGACG GCGAGGAAGT GATGCAGCGC ATCGCGCGCC GGCCGGGCGT GGTCTACACC
GCGCTGGTGC CGAACCTGCG CGGTGCCGAG CGTGCGCTGG AGAGCCGCAT CGGCGAATTC
AACGTCGTCA TGTCGGTGAG CGAAACCCAC AACCTCAGCA ACCTGCGCAT GACGCGCGAG
CAGTCGTTCG CGCAGCTGGC CGAGGTCATC GCGCTGGCCA GGCAGGCCGG CGTGCCCGTG
AACGTGTCGC TCTCTTGCGT GTTCGGCTGC CCGATGGAAG GCGAGGTGCC CCTGGCCGTA
GTCCAGGAAT GGATCGACCG CTTCGCGGCG CTGCAAGTGC AGGGCGTGAC GCTGTGCGAC
ACCACGGGCA TGGCTTTTCC GACGCAGGTG CAGGCCGTCT GCGAAGCCGT GATGGCAAGG
CACCCCGGGC TGCAATGGAC GGCGCACTTC CACAACACGC GCGGCATGGG GCTCGCGAAC
ACGGTGGCGG CGGTCGAGTC GGGCATCGAG CGGCTCGACA TGTCGCTGGG CGGCATCGGC
GGCTGCCCGT ATGCGCCCGG CGCCACCGGC AACGTTGCCA CCGAGGACGT GGTGCACATG
CTGCAATGCA TGGGCTACGA CACCGGCATG GATCTGGGCG GACTGATAGC TGCCGCCTCG
GAACTCGAAG CGCTGGTGGA GCACGACTTG CCGAGCCAGG TTTCGCGCGC CGGCCACCGG
CTCACGCGGC ATTCGCCGCC GGCGGATTTC AACGACATCG CGGCGCGTGC GCATGCGCGT
CGAGCCAAGG AGCTGAACCC ATGA
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| Protein sequence | MKEGKGKRLF INEVATRDGF QMESRFIPTD DKIALIDRLG TLGYAKIEVT SFTSAKAIPA
LRDGEEVMQR IARRPGVVYT ALVPNLRGAE RALESRIGEF NVVMSVSETH NLSNLRMTRE
QSFAQLAEVI ALARQAGVPV NVSLSCVFGC PMEGEVPLAV VQEWIDRFAA LQVQGVTLCD
TTGMAFPTQV QAVCEAVMAR HPGLQWTAHF HNTRGMGLAN TVAAVESGIE RLDMSLGGIG
GCPYAPGATG NVATEDVVHM LQCMGYDTGM DLGGLIAAAS ELEALVEHDL PSQVSRAGHR
LTRHSPPADF NDIAARAHAR RAKELNP
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