| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3262 |
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| Symbol | |
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| ID | 7973658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3436730 |
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| End bp | 3437533 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793847 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_002945146 |
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| Protein GI | 239816236 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.569935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAAGA TTTATCCCTC CGCAGACGCG GCACTCAAGG GGGTCGTGGC CGACGGGCAG
ACGCTCGCGG TCGGCGGCTT CGGCCTGTGC GGCATTCCCG AGGCGCTGAT CGACGCGCTG
CGCGACTCCG GCGCCAAGGA CCTCACCTGC ATCTCCAACA ACGCGGGCGT CGACGGCTTC
GGCCTCGGCA AGCTGCTCGA GACGCGCCAG ATCAAGAAGA TGATCGCGTC CTACGTGGGC
GAGAACAAGG AGTTCGAGCG CCAGTACCTC GCGGGCGAAC TGCAGCTCGA ATTCACGCCC
CAGGGCACGC TGGCCGAGAA GCTGCGCGCG GGCGGCGCGG GCATTCCGGC CTTCTTCACC
AAGACCGGCG TCGGCACGCA AGTGGCCGAG GGCAAGGAAC TGCGCGAGTT CGACGGCGAA
ACCTACGTGA TGGAGCGCTC GCTGGTGCCC GACGTGGCGC TGGTCAAGGC CGACGTGGCC
GACAAGTCGG GCAACCTGCG CTTCCGCCTC ACGGCGCGCA ACTTCAACCC GGCCGCCGCC
ATGGCCGGCA AGATCTGCAT CGTCGAGGTC GAGAAGATCG TCGAGGTGGG CGAGCTGGCC
CCTGACGACA TCCACCTGCC GGGCATCTAC GTGCACCGCA TCGTGCTCAA CGCCAAGCCC
GAGAAGCGCA TCGAGAAGCG CACCGTGAGT GCAGCCGCGC CGGCCGATGC GGCCGCCGCC
AAGGTCGAAG CGCAGGCCGC CATCGCGCAG GCCGCCGCCG GCAGCGAAGT GCCCGCCCCC
GTCAAGAACA ACAAAGGAGC CTGA
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| Protein sequence | MNKIYPSADA ALKGVVADGQ TLAVGGFGLC GIPEALIDAL RDSGAKDLTC ISNNAGVDGF
GLGKLLETRQ IKKMIASYVG ENKEFERQYL AGELQLEFTP QGTLAEKLRA GGAGIPAFFT
KTGVGTQVAE GKELREFDGE TYVMERSLVP DVALVKADVA DKSGNLRFRL TARNFNPAAA
MAGKICIVEV EKIVEVGELA PDDIHLPGIY VHRIVLNAKP EKRIEKRTVS AAAPADAAAA
KVEAQAAIAQ AAAGSEVPAP VKNNKGA
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