| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3258 |
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| Symbol | |
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| ID | 7973654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3433362 |
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| End bp | 3434258 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793843 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002945142 |
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| Protein GI | 239816232 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTGGG ACAACCTTCG CTACTTTCTG GAGCTGGCCC GCTCGGGCAC GCTGATGAGC
GCCGCGCGCC GGCTCGAGGT GGACCACACC ACGGTGGCGC GGCGCATCCA GGCGCTCGAA
AAGGAAGTGG GCGCGCCGCT TTTCTCGCGC GAGTCGGGCG GCCACCGGCT CACCGAGGCG
GGCCGCAAGC TGCAGCCGCA GGTCGAGGCG ATGGAAAGCG CGTTCCAGGC GGTGGAAAGC
ACCGCGCCGG CCTCGCAGGA GGGCTTGTCG GGGTTGATCC GCATCGGCGC GACCGAAGGC
TTCGGCACCG TCGTGCTGGC GCCGCAGCTG GCGCTTTTCG CGCAGCAGCA CCCCAGGCTC
ACCATCGACC TGCTCGCGAT GCCGCGGCTG GTGCACCTGT CGCGGCGCGA GGCCGACATC
GTGATCTCGC TCGAACGCCC GGCGCGCGGG CCGGTGGTCG TGAGCAAGCT CACCGACTAC
ACGCTCAGGC TCTATGCATC GAAGAAGTAC CTGGCCGCGC ACAAGCCCAT CAAGACGCGC
GAAGACCTGC GCGGCCACAC CTTCATCAGC TACGTGGACG ACCTGCTCTT CAGCAAGGAG
CTGCAGTACC TGGACGAACT GCACCGCCCC GATGCCTTTG CTCTGCGCAG CACCAGCGTG
CTCGCGCAGC ACCGCGCGGT GCTGGCGGGC GCGGGCATCG CGGTGCTGCC GGCCTTCATC
GCGGAGAACG ACGGCGCGCT CAAGCCCGTG CTGCCGGGGC AGGCGAATTT CACGCGCACG
TTCTGGATGT CGATGCCCGC GGAAACCAAG CACCTGGTGC GCATGCAGGC GGTGTGGGAG
TTCCTGCGCG AGACGGTGCA GGCACAGCGG CAGCTGCTGC TGCCCGCGCC CGCGTGA
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| Protein sequence | MDWDNLRYFL ELARSGTLMS AARRLEVDHT TVARRIQALE KEVGAPLFSR ESGGHRLTEA
GRKLQPQVEA MESAFQAVES TAPASQEGLS GLIRIGATEG FGTVVLAPQL ALFAQQHPRL
TIDLLAMPRL VHLSRREADI VISLERPARG PVVVSKLTDY TLRLYASKKY LAAHKPIKTR
EDLRGHTFIS YVDDLLFSKE LQYLDELHRP DAFALRSTSV LAQHRAVLAG AGIAVLPAFI
AENDGALKPV LPGQANFTRT FWMSMPAETK HLVRMQAVWE FLRETVQAQR QLLLPAPA
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