| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3253 |
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| Symbol | |
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| ID | 7973649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3428077 |
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| End bp | 3428979 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793838 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_002945137 |
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| Protein GI | 239816227 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.337633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCG CATTCATCGG CCTCGGCCAC ATGGGCGGAC CCATGGCCCT GAACCTGCGC
AAGGCGGGCT TTGCGGTCAA GGCCTTCGAC CTGTCGGACG AGGCCTGCAA GAAATACGCG
GCCGAAGGCC TGGCCATTGC CGCATCGGCC GCTGAATCGG TGACCGATGC CGACGTGGTC
ATCAGCATGC TGCCGGCCAG TGCGCACGTG GAAGGCCTGT TCCTCGGTAG CGGCGGCAGC
AAGCCCGGCC TGCTCGACAG CATCCGCGCC GGCACGCTCG TGATCGACAG CAGCACCATC
GCCGCCGCCA CCTCGCGCAA GGTGGCCGAT GCGGCCGCCG CCAAGGGCAT CGCGATGATC
GATGCGCCGG TTTCCGGCGG CACGGGCGGC GCGATTGCAG GCACGCTGAC CTTCATGGTG
GGCGGCGAGG CCGACGACCT CGAACGCGCA CGTCCCGTGC TCGAGAAGAT GGGTGCCAAC
ATCTTCCACG CGGGCGGCGT GGGCGCAGGC CAGACCGCCA AGATCTGCAA CAACATGCTG
CTCGGCATCC TGATGATCGG CACCTCGGAG GCGCTGGCGC TGGGCGTGGC CAACGGGCTC
GATCCCAAGG TGCTGTCCGA GATCATGCGG CGCAGTTCCG GCGGCAACTG GGCGCTCGAA
AAGTACAACC CGATGCCCGG CGTGATGGAA ACCGCGCCCG CATCGAAGAA CTACGCAGGC
GGCTTCGGCA CCGACCTGAT GCTCAAGGAC CTGGGCCTCG CACAGGAAAA CGCCACCGCC
GTGCGCGCCG CCACGCCGCT GGGCGGGCTC GCGCGCAGCC TCTATGCCGC GCACAGCCTC
GCGGGCCATG GCGCGCTCGA TTTCTCGAGC GTGCTGAAGC TGCTGCAGAA GGCGTCGTCC
TAG
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| Protein sequence | MKIAFIGLGH MGGPMALNLR KAGFAVKAFD LSDEACKKYA AEGLAIAASA AESVTDADVV
ISMLPASAHV EGLFLGSGGS KPGLLDSIRA GTLVIDSSTI AAATSRKVAD AAAAKGIAMI
DAPVSGGTGG AIAGTLTFMV GGEADDLERA RPVLEKMGAN IFHAGGVGAG QTAKICNNML
LGILMIGTSE ALALGVANGL DPKVLSEIMR RSSGGNWALE KYNPMPGVME TAPASKNYAG
GFGTDLMLKD LGLAQENATA VRAATPLGGL ARSLYAAHSL AGHGALDFSS VLKLLQKASS
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