Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3245 |
Symbol | |
ID | 7973641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3420036 |
End bp | 3420611 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644793830 |
Product | DNA-3-methyladenine glycosylase I |
Protein accession | YP_002945129 |
Protein GI | 239816219 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2818] 3-methyladenine DNA glycosylase |
TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCCCG AAACCAAGCC CCGCTGCACC TGGGCCCAGA GCGATCCGCT GCTGGCCTCC TACCACGACG CCGAATGGGG CGTGCCCGAG CGCGACAGCC GCGCGCTGTG GGAAAAGCTC ATGCTCGACG GCTTCCAGGC GGGCCTCTCG TGGCTCACGA TCCTGCGCAA GCGCGATGCG TTCCGTGCTT CATTCGAGGG CTTCGTGCCC GAAAAAGTGG CACGGTTCAC CGCGGCCGAC GTCGACCGGC TGATGCTGGA CGCGGGCATC GTGCGCTCGC GCGCCAAGAT CGAGGCCACC ATCGGCAACG CCCGCGCCTA CCTGGCGATG CAAGCCGCGG GCGAGGATTT TTCGGAATTC GTCTGGGGCA TGGCCGGCGG CAAGCCGATC GTCAACAGGA CCGGCGCAGT GCCGACGAAG ACGCCGCTTT CGGAACAGAT GTCGGCGGCC CTGAAGAAGC GCGGCTTCAA GTTCGTGGGG CCGGTGATCG TCTATGCATG GATGCAGGCC ACCGGCATCG TCGACGACCA CGCACCCGAC TGCTTCTGCC ACCACGCCGC GCCGCGGCAG CGCTGA
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Protein sequence | MPPETKPRCT WAQSDPLLAS YHDAEWGVPE RDSRALWEKL MLDGFQAGLS WLTILRKRDA FRASFEGFVP EKVARFTAAD VDRLMLDAGI VRSRAKIEAT IGNARAYLAM QAAGEDFSEF VWGMAGGKPI VNRTGAVPTK TPLSEQMSAA LKKRGFKFVG PVIVYAWMQA TGIVDDHAPD CFCHHAAPRQ R
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