| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3225 |
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| Symbol | |
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| ID | 7973458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3403862 |
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| End bp | 3405271 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644793810 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945109 |
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| Protein GI | 239816199 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCAACA CCGCGTTGCG CGAACCTGCC TTTACGGACG CGGTCGTCAC CGAAGCGATC
CGATGGACCG AGGAGAAAGG TCCGCTCGAC GATGCAGAGG TCCTGCGCGC CGCCCTCTCC
CGCAGCTCCG GCGCACCGGC ACGCATCACC GCACGCGCGC TGTTGCTCGG TGAACGCATC
GGGCTGCAAT CCGAACTGGC ACGCGCCCGC CAGTGGGCGC CATGGGTGCT GCTCGGGCTG
GTGGCGCTCA TCGTCACGGC AGGCCTGGGC CTCGCGGGCA ACGTGGTCGG CGGCGGCGAA
CGGCACATCA ACGTGATCGT GGCGCTTGCG AGCCTGCTCG GCCTGCACGC GCTCACGCTG
CTGCTGTGGC TGGCCGGCCT GTGGCTGCCG CTGGGCGCGT TCTCCACCAG TTCGCTCGGC
TGGATCTGGC TCTCGCTCAC CGCGCGCGTG GCCGGCGGCA AGCGCGGCCA GGCGCCGGTG
CTGGTGCGGG CCGCCACCGG GCTGCTGGCG CGCGCCAGGC TGCTGCCCTG GGCGCTGGGG
CTGGTGAGCC ACAGCATCTG GTCGCTCTCG TTCGCGGTGG TGCTGGCCGC GCTGCTGTTC
GCGCTGGCGT TCCGCAGCTA CACGCTGAGC TGGGAGACGA CCATCCTCGA CCCGGCCTTC
TTCGTGCACG CCGTGCAGCT GCTGGGCTGG GCGCCGTCGC AGATCGGCTT TCCGGTTCCC
GAAGCCGCGA CCGTGCTCTC GCCTTCTCCC GGCGCCGCGG GCCAGCGCAC GTGGGCGCTG
TGGCTGACCG GCTGCATCGT GGTGTACGGG CTGCTGCCGC GCCTGGCGCT GGTGCTGCTG
AGCGCGGCGG TGTGGCAGCG GCGCCGCGCC GCGCTGCAGC CCGACTGGAG CGAGCCCTAC
TACCGCAAGC TCGCGGCGCG CTTTGCCGCG CTCGCACCGC CCGCCATCGT CGATGCCGAT
CCGGGGCGCG CGCCGGGCGC GGCGCCGGCG GGCCTCGCGC CTTCTCAGTT GCAGGACGAA
CTGCTCGTCA TCGGCTTCGA GCTGCCCGCG GATACGCCGT GGCCGCCCGA GGGCCTGCCC
GCCATCGCCC CGGCCCAGGT GCAGCGCATC GACGGCAGCG CGCCCGCGCG GCGCGCGCTG
CTCGACCGGC TGGCACAGGC CCGCCCGCGT GCCGTGCTGC TGGTGTGCCA CGCCGCATCG
AGCCCCGACC GCGGCACCGA ACGCTTCCTG CGCGAAGTGC TGGCCCATTG CGGCGAATGC
CGGCTCTGGC TGGCACCGGC CGCCAGGGAC GCGGCCGGTG CGGACGCATC GCAGCGCTGG
ATCGACTGGC TGCAGGGCAC CGGCCTTGCG CGCGTCGCGG CCACGCCGCG GCTCGAAGAC
GCATTGCAAG GCCTGGGAGC CGCCCCATGA
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| Protein sequence | MTNTALREPA FTDAVVTEAI RWTEEKGPLD DAEVLRAALS RSSGAPARIT ARALLLGERI
GLQSELARAR QWAPWVLLGL VALIVTAGLG LAGNVVGGGE RHINVIVALA SLLGLHALTL
LLWLAGLWLP LGAFSTSSLG WIWLSLTARV AGGKRGQAPV LVRAATGLLA RARLLPWALG
LVSHSIWSLS FAVVLAALLF ALAFRSYTLS WETTILDPAF FVHAVQLLGW APSQIGFPVP
EAATVLSPSP GAAGQRTWAL WLTGCIVVYG LLPRLALVLL SAAVWQRRRA ALQPDWSEPY
YRKLAARFAA LAPPAIVDAD PGRAPGAAPA GLAPSQLQDE LLVIGFELPA DTPWPPEGLP
AIAPAQVQRI DGSAPARRAL LDRLAQARPR AVLLVCHAAS SPDRGTERFL REVLAHCGEC
RLWLAPAARD AAGADASQRW IDWLQGTGLA RVAATPRLED ALQGLGAAP
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