| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3216 |
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| Symbol | |
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| ID | 7973449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3395187 |
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| End bp | 3396185 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793801 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945100 |
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| Protein GI | 239816190 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC CCTGCGGCAC CCGCCGCGCA TTCGGCGCGG CGCTCGGCGC GGCGGCCCTG
CTGGGCGTGG CGCCCCTGGC GCTGGCGCAA GACTTTCCGG TGCGCGGCGG CAAGCCGATA
CGCATCGTGG TGGGCTTCAC GGCCGGCGGC GGCACCGACG CGCAGGCGCG CATCGTGGCG
CAGAAGCTCG GCGAGGTGCT GGGCACGGGC GTGATCGTCG ACAACAAGCC CGGCGCCAGC
ACCATGCTGG CCGCAAGCGA GGTGGCGCGC GCGCTGCCGG ACGGCTACAC CCTGCTCTAT
GCGCCCTCCT CGACCATGGC GCAGAACCCG CACACCTTCT CGCAGGTGCC CTACGACCCG
TTCAAGGACT TCACCGCCAT CTCGATGGGC GGCCGCGGGC CGCTGGTGCT GTCGATGAGC
ACCACCGTGC CGGCCCGCAA CGTGAAGGAG CTCATCGCCT ACGTGAAGGC CAACCCCGGC
AAGGTGAGCT ACGCCTCGTT CGGCGCGGGC ACCTCGTCGC ACATCTACGG CGAGGCCTTC
GTGAAGAAAG CCGGCATCGA CGCGGTGCAC ATTCCCTACA AGGGCGGTTC GGACGCGGCC
AAGGACCTGA TCGGCGGCCG CGTGCAGTAC ATGTTCGATT CGGCCTCCTC GGCCATCATC
ACCTCGGGCA CCGGCAAGGT GAAGATCCTG GCGATTGCCG CGAACGAGCG CATTGCCGCG
CTGCCCGAGG TGCCGACCTT CGCCGAGCAG GGCCTGCCCG GCCTCGACCT GCCGAGCTGG
CTCGGCTTCT ACGGGCCGGC CCACATGCCC GCGCCGGTGG TCGCAAAGCT CAACGCCGCG
CTCGCGCAGG TGCTGGCGAT GCCGCAGGTG CGCGAGTTCT ACCGCAGCGG CGGCTACGAA
GCCGGGGCCA GCACGCCCGA GGAATTCGCC GGCGTCACGC GCTCGACCTA CGAGCGCTGG
GGCGCGATGG TGCAGCAGGT CGGGCTGGCG AAGCAATGA
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| Protein sequence | MKKPCGTRRA FGAALGAAAL LGVAPLALAQ DFPVRGGKPI RIVVGFTAGG GTDAQARIVA
QKLGEVLGTG VIVDNKPGAS TMLAASEVAR ALPDGYTLLY APSSTMAQNP HTFSQVPYDP
FKDFTAISMG GRGPLVLSMS TTVPARNVKE LIAYVKANPG KVSYASFGAG TSSHIYGEAF
VKKAGIDAVH IPYKGGSDAA KDLIGGRVQY MFDSASSAII TSGTGKVKIL AIAANERIAA
LPEVPTFAEQ GLPGLDLPSW LGFYGPAHMP APVVAKLNAA LAQVLAMPQV REFYRSGGYE
AGASTPEEFA GVTRSTYERW GAMVQQVGLA KQ
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