| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3200 |
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| Symbol | |
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| ID | 7973433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3374891 |
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| End bp | 3376429 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793785 |
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| Product | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
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| Protein accession | YP_002945084 |
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| Protein GI | 239816174 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0836] Mannose-1-phosphate guanylyltransferase |
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| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCC CCACCATCCA CCCCGTCGTG CTGTGCGGCG GCAGCGGCAC GCGCCTGTGG
CCTCTTTCGC GCAAGACCCT GCCCAAGCAG TTCGCACCGC TGATCGGCAA CAAGAGCCTG
CTGCAGCTGA CGCTGGAGCG CCTGTGCAGC CTCAACCGCG ACATCACCTG CGTGGCATCG
GAAGACCACC GCTTCCTGGT GCGCGAGGCG GTCGACAAGG CCGGCGCCAC CGGCCGCCAG
ATCCTGGAGC CGGTGGCACG CAACACGGCG GCCGCCATGG CCGCGGCGGC GCTGCGCGCA
GGGCCTGACG ACCTGCTGCT GTTCGCGCCG GCCGACCACC ACATTCCCGA CACCGCGCTT
TTCGCGCACA CGGTGCGAAG CGGCATCGAC GCGGCGCTGG CCGGGCGCAT CGTGACCTTC
GGCGTGGCGC CCAGCTTCGC GAGCACGGCC TATGGCTACA TCGAGGCCGG CGCGCCCGCG
GCCGACGGCC ACAGCCACGC CGTGGTGCGC TTCGTGGAAA AGCCCACGGC CGCCGTGGCC
GAGTCGCTGA TCCTGCACGG CGGCTACTGC TGGAATGCCG GCATCTTCCT GGCGCGCGCC
GACATCCTCG TTGCGGCGCT GCGCACGCAT GCGCCCGACA TCCTCGAGGC CTGCGAACGC
GCCACCGCCG CCATCACGGC CGACGGCAGC TTCGACCGGC TGGACCGCGA GGCCTTCGAG
GCCTGCCGCA GCGACAGCAT CGACTATGCG GTGCTCGAAA AGCACGACGC CATCTCGGTC
GTCAAGTTCA ACGGCAACTG GAGCGACGTC GGCAGCTGGA ACGCGGTGGC CACGCTGCAC
CCGCAGGACG GCAGCGGCAA CCGCCTGAGC GGCAACGCCA GCGCGCTGCG TTCGAGCGAC
ACCTTCATCC ACGCGCCGCA CCGCCGCGTG GTGGCGCTGG GCACGCGCGG CCTGATCATC
GTGGACACGC CCGATGCCGT GCTGGTGGCG GGCGCGGACT GCGCCGAGCA GGTCGGCGAG
GTGGTGCGGA TGCTCGCGGC CGAAGGCCAG GCCGAGGCCA CCGAACACCG GCGCGTGGTG
CGCCCCTGGG GCGCCTACGA CAAGCTCGAC TTCGGCGAGC GCTTCCAGGT GAAGCGGCTC
ACCGTCAAGC CCGGCGCCAA GCTGTCGCTG CAGATGCACC ACCACCGCGC CGAGCACTGG
ATCGTGGTGC AGGGCACGGC CAAGGCCACC TGCGACGGGC AGGTCACGCT GGTGCGCGAG
AACGAATCCA TCTACCTGCC GCTGGGCGCC ATCCACCGGC TGGAGAACCC GGGCAAGACG
ATGCTCGAAG TGATCGAGGT GCAGACCGGC GGCTACCTGG GCGAGGACGA CATCGTGCGC
TTCGACGACA CCTATGGCCG CTGCCCTTCG CTCAAGGCGC GTGGCGGCGA TGCATTGCCG
CTGCCGGATG CCGCCGTGGC CGCCGTGGCC GCCGCGGCCT CGGTGCCCGT GGTGGCTGCC
ATGCCGGTGG CCGCGCCGCA GCTGGCGCCC GCCCCGTAG
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| Protein sequence | MTTPTIHPVV LCGGSGTRLW PLSRKTLPKQ FAPLIGNKSL LQLTLERLCS LNRDITCVAS
EDHRFLVREA VDKAGATGRQ ILEPVARNTA AAMAAAALRA GPDDLLLFAP ADHHIPDTAL
FAHTVRSGID AALAGRIVTF GVAPSFASTA YGYIEAGAPA ADGHSHAVVR FVEKPTAAVA
ESLILHGGYC WNAGIFLARA DILVAALRTH APDILEACER ATAAITADGS FDRLDREAFE
ACRSDSIDYA VLEKHDAISV VKFNGNWSDV GSWNAVATLH PQDGSGNRLS GNASALRSSD
TFIHAPHRRV VALGTRGLII VDTPDAVLVA GADCAEQVGE VVRMLAAEGQ AEATEHRRVV
RPWGAYDKLD FGERFQVKRL TVKPGAKLSL QMHHHRAEHW IVVQGTAKAT CDGQVTLVRE
NESIYLPLGA IHRLENPGKT MLEVIEVQTG GYLGEDDIVR FDDTYGRCPS LKARGGDALP
LPDAAVAAVA AAASVPVVAA MPVAAPQLAP AP
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