| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3196 |
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| Symbol | |
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| ID | 7973429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3370536 |
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| End bp | 3371474 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793781 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945080 |
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| Protein GI | 239816170 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGA CCCATTCACT TGCCTTCATC GTGGTGGAAG ACCGCCAGAA CAAGCCCCTG
CTGCTGTGCC GCGAATCCGC GGCGCGTGCC GAGGAGCCGC TGATCGTGCT GTCGGGCACC
GACGCCGGGC CCGGCTACGA GCGCCTGTGC CGCACCTACG TGCACCTGTC GAGCAATCCG
CCGGAGTTCG AGAAGATCTG CTTCCGGCGC TACTTCCTGC TGTCGGAATA CCTGCGCGCC
CACCCCGAGC ACCGCGAATT CGTGCTGATC GACAGCGACG TGCTGCTGTT CCGCGGCATC
GGCGCGCACA TCCGGCGCGT GGCCGGCAAG GCGGATTTCT CTGGCTCCTA CATGCGCACC
AACGATGGCT GGGACCCCTG CCAGATATCG CCGCACGTCA GCTACTGGAC CGCGGCGGGC
CTGCAGCAGT TCATCGCCTT CCTGCTCAAC ACCTATGCAT CGCCCAGCGG CCGCAGGAAG
CTGCGCGCGA TCGCGGCGCG GTTTGCCGCG CGGGGCGTGC GCGGCGGGGT GTCTGACATG
ACCCTGCTGC ACCTCTGGGC CCATGCGAGC GGCAACGCGG CGCCCATCAA CCGGGTGTTC
GGCGGACGCG TGATCGACCA CAACATCAAC GGCGGGCACA ACCTGCTCGT GAACGAATTC
CAGGGCCGGG GCGGCGCCAA GCGCCTCGTG TTCGTCGGCG GCCAGCCCTG CGTGGTCACG
CCGTCGGGCG AACTGGTGAA CGTGCTGGCG CTGCACTTCC AGGGCAGCGC CAAGATCGCG
ATGGCGCACG TGCTGCACGG GCGGGTGCAC ACGGTCGCGC TGCTCACGGC CGCACTGCGG
CTCGCGCGCC GGGCCAAGAA CTGGGCCTTC GGCATGCGCC GGCTGGCGCA GCGCCCCGCG
GGCGGCACGC GCTTCGCAGG CGCCGCCGGG CCGAAATGA
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| Protein sequence | MTMTHSLAFI VVEDRQNKPL LLCRESAARA EEPLIVLSGT DAGPGYERLC RTYVHLSSNP
PEFEKICFRR YFLLSEYLRA HPEHREFVLI DSDVLLFRGI GAHIRRVAGK ADFSGSYMRT
NDGWDPCQIS PHVSYWTAAG LQQFIAFLLN TYASPSGRRK LRAIAARFAA RGVRGGVSDM
TLLHLWAHAS GNAAPINRVF GGRVIDHNIN GGHNLLVNEF QGRGGAKRLV FVGGQPCVVT
PSGELVNVLA LHFQGSAKIA MAHVLHGRVH TVALLTAALR LARRAKNWAF GMRRLAQRPA
GGTRFAGAAG PK
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