Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3186 |
Symbol | |
ID | 7973419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3359389 |
End bp | 3360150 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644793771 |
Product | 4'-phosphopantetheinyl transferase |
Protein accession | YP_002945070 |
Protein GI | 239816160 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2091] Phosphopantetheinyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.23954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTCCG CAGCTTTCTC CCTGACTTCC GTCGATGCGC CGGTCTGCCG GTATCTCGAA CTGGACGGCG AACCCGGCCC CGAGGCCGAG CGGCTCCTCT CCGACGAGGA ACTGGAGCGC GCCGCGCAGT TCCGGTTCGC GGCCGACCGG CAGCGCTTCG TGGCCGCGCA TGCCGCGCTG CGCTGCGCGC TGGCTGCGCA GACGGGCGAA CGCCCCGAGG CGCTGCGCTT CACCCGCAGC GCATTCGGTA AGCCTTCGCT GTCGGGCTGG CCGCGGCTGC GGTTCTCGCT GAGCCACAGC CTGGGGCTGG GACTGCTCGC CATCGGCGAG CGCGGTCCGC TGGGGGCCGA CGTCGAGCTG CTGCGGCCGA TTCCCGACGC GCTCGCGCTG GCCGCGCAGC ATTTCACGGA CAGCGAGAGC GAGGCGCTGC TGGCCCTGCC CGCCGCCGAG CGCGAGCATG CCTTCCTGAC CTGCTGGACG CGCAAGGAAG CCTGCCTCAA GGCCATCGGC CTCGGGCTGA TCGTGCCGAC CGAGCGCTTC GAGGTGGGGC TGGAGCCGGA CTGCCGGAGC GTGGAAGTGC CCGTGGCCGG CCGCATCCTG TGGCTCGTGC TGCAGCCCGC GCCGCCGCGC GTGGACAGCG TGGGAGCGAT TGCGGAATGG CGGCAGACGC ACGTGCGCGC CAGCGTGCCG AGTTTCGCGG CGCAGACCTG CACCCGCTCC CGCTCGGCGG AAAGGCGCGC AGCGCAAAGG GTGCCGCAAT GA
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Protein sequence | MVSAAFSLTS VDAPVCRYLE LDGEPGPEAE RLLSDEELER AAQFRFAADR QRFVAAHAAL RCALAAQTGE RPEALRFTRS AFGKPSLSGW PRLRFSLSHS LGLGLLAIGE RGPLGADVEL LRPIPDALAL AAQHFTDSES EALLALPAAE REHAFLTCWT RKEACLKAIG LGLIVPTERF EVGLEPDCRS VEVPVAGRIL WLVLQPAPPR VDSVGAIAEW RQTHVRASVP SFAAQTCTRS RSAERRAAQR VPQ
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