Gene Vapar_3186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3186 
Symbol 
ID7973419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3359389 
End bp3360150 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content73% 
IMG OID644793771 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_002945070 
Protein GI239816160 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.23954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTCCG CAGCTTTCTC CCTGACTTCC GTCGATGCGC CGGTCTGCCG GTATCTCGAA 
CTGGACGGCG AACCCGGCCC CGAGGCCGAG CGGCTCCTCT CCGACGAGGA ACTGGAGCGC
GCCGCGCAGT TCCGGTTCGC GGCCGACCGG CAGCGCTTCG TGGCCGCGCA TGCCGCGCTG
CGCTGCGCGC TGGCTGCGCA GACGGGCGAA CGCCCCGAGG CGCTGCGCTT CACCCGCAGC
GCATTCGGTA AGCCTTCGCT GTCGGGCTGG CCGCGGCTGC GGTTCTCGCT GAGCCACAGC
CTGGGGCTGG GACTGCTCGC CATCGGCGAG CGCGGTCCGC TGGGGGCCGA CGTCGAGCTG
CTGCGGCCGA TTCCCGACGC GCTCGCGCTG GCCGCGCAGC ATTTCACGGA CAGCGAGAGC
GAGGCGCTGC TGGCCCTGCC CGCCGCCGAG CGCGAGCATG CCTTCCTGAC CTGCTGGACG
CGCAAGGAAG CCTGCCTCAA GGCCATCGGC CTCGGGCTGA TCGTGCCGAC CGAGCGCTTC
GAGGTGGGGC TGGAGCCGGA CTGCCGGAGC GTGGAAGTGC CCGTGGCCGG CCGCATCCTG
TGGCTCGTGC TGCAGCCCGC GCCGCCGCGC GTGGACAGCG TGGGAGCGAT TGCGGAATGG
CGGCAGACGC ACGTGCGCGC CAGCGTGCCG AGTTTCGCGG CGCAGACCTG CACCCGCTCC
CGCTCGGCGG AAAGGCGCGC AGCGCAAAGG GTGCCGCAAT GA
 
Protein sequence
MVSAAFSLTS VDAPVCRYLE LDGEPGPEAE RLLSDEELER AAQFRFAADR QRFVAAHAAL 
RCALAAQTGE RPEALRFTRS AFGKPSLSGW PRLRFSLSHS LGLGLLAIGE RGPLGADVEL
LRPIPDALAL AAQHFTDSES EALLALPAAE REHAFLTCWT RKEACLKAIG LGLIVPTERF
EVGLEPDCRS VEVPVAGRIL WLVLQPAPPR VDSVGAIAEW RQTHVRASVP SFAAQTCTRS
RSAERRAAQR VPQ