| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3174 |
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| Symbol | |
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| ID | 7973406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3336868 |
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| End bp | 3338124 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793758 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_002945058 |
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| Protein GI | 239816148 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTTC TGATCCTCGG CAGCGGTGTC ATCGGCACCT CGGTGGCGTA CTACCTGGCG
CGCGCCGGCC ATGACGTGAC GGTGCTCGAG CGCCAGCCCG CGCCCGCGCT CGAAACCAGC
TTCGGCAACG CGGGCGAGGT GTCGCCCGGC TACTCCGCGC CCTGGGCCGG GCCCGGCGTG
CCGCTCAAGG CCATCAAGTG GATGCTCATG CAGCACAGCC CGCTGGTGAT CAAGCCCATG
CTCGATCCGG CCATGTGGCG CTGGGGCCTG TCGATGCTGT GCAATTGCAC GCAGGCGCGC
TACGAGCTCA ACAAGGGCCG CATGGTGCGG CTTGCCGAAT ACAGCCGCGA CTGCCTGAAG
GCGCTGCGCA CCGACACCGG CATCCGCTAT GACGAGCGTG CGCTCGGCAC CCTGCAGCTC
TTTCGGACCC AGCAGCAGCT CGACGGCATC GCCAAGGACG TGGAGGTGCT CCAGGCCTCC
GGCGTACCCT ACCAGGTGCT CGACCGCGAA GGCTGCGTGC AGTACGAGCC GGCGCTCGCG
GCCGTCAAGA GCAAGTTCGT CGGCGGGCTG CGCCTGCCGG GCGACGAGAC CGGCGACTGC
TTCAAGTTCA CGCAGGCGCT GGCCGTGCTG GCCGAGGCGG CCGGCGCGAA GTTCCGCTTT
GGCGTGGCCA TCCAGGCCAT CGAGCACGAT GCCGGCGGCG TCACGGCCGT GCGCACCGAT
GCCGGCCGCT TCACGGCCGA CCGCTACGTG GTGGCGCTCG GCAGCTACTC GCCGGCCATG
GTCAAGCCAC TGGGCATCGA CCTGCCGGTG TACCCGGTCA AGGGCTTCTC GATCACCGTG
CCCATCTCCG ACGTCAGCGG CGCGCCCGAA TCCACCGTGA TGGACGAGAC CTTCAAGGTG
GCCGTCACGC GGCTGGGCGA GCGCATCCGC GTGGGCGGCA CCGCGCAGCT CTCGGGCTTC
GACCTGCGGC TCGATGCGAA GCGGCGCGAC ACGCTCGAGC ACGTCGTGAC CGATCTCTTT
CCGAAGGGCG GCAATGTGCG CGACGCCTCC TTCTGGACCG GCCTGCGCCC CATGACGCCC
GACGGCACGC CGGTGATCGG TGCCACGCGC ATTCCCAACC TGATGCTGAG CACCGGCCAC
GGCACGCTCG GCTGGACCAT GGCGGCCGGC ACCGGCCGCG TGATGGCCGA CCTGATCGAT
GGCCGAAACC CCGCCATCGA CATGGAAGGC CTGACGGTGG CGCGCTACGG CGCCTGA
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| Protein sequence | MQVLILGSGV IGTSVAYYLA RAGHDVTVLE RQPAPALETS FGNAGEVSPG YSAPWAGPGV
PLKAIKWMLM QHSPLVIKPM LDPAMWRWGL SMLCNCTQAR YELNKGRMVR LAEYSRDCLK
ALRTDTGIRY DERALGTLQL FRTQQQLDGI AKDVEVLQAS GVPYQVLDRE GCVQYEPALA
AVKSKFVGGL RLPGDETGDC FKFTQALAVL AEAAGAKFRF GVAIQAIEHD AGGVTAVRTD
AGRFTADRYV VALGSYSPAM VKPLGIDLPV YPVKGFSITV PISDVSGAPE STVMDETFKV
AVTRLGERIR VGGTAQLSGF DLRLDAKRRD TLEHVVTDLF PKGGNVRDAS FWTGLRPMTP
DGTPVIGATR IPNLMLSTGH GTLGWTMAAG TGRVMADLID GRNPAIDMEG LTVARYGA
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