| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3173 |
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| Symbol | |
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| ID | 7973405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3335694 |
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| End bp | 3336680 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793757 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945057 |
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| Protein GI | 239816147 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCCA CACGCCGACA AGCCATTGCA GCCGCGCTCG CCCTCGGCGT CGCCTGCGCC
ACGGGGCCCG CCAGGGCCGA GAGCAGCTAT CCGAGCAAGC CGATCACGCT GGTCGTCGCC
TATCCGGCCG GCGGCGACAC CGACGCGCTG GCGCGGCTCT TCGCCGAGAA GCTGTCGGCG
CGCGTGGGCC AGCCCGTGGT GGTCGACAAC CGCCCCGGCG CCAGCGGCAT CATCGGCAGC
GCCTATGTCT CGAAGGCGCA GCCCGACGGC TACACGCTGC TGCTTTCGCC CAGCACCTTC
TCGATCGCGC AGCTGGTGCT CAAGACGGGC GGCACCTCGG GCTACGACGT GCTGAACGGC
TTCACGCCGA TCGTGCAGAC CGGCAGCCAG CCGCTGTTCC TGGTGGCGGG CGGCGCCAGC
GGCCTCGCAA GCGCCAAGGA CCTGGTGGCC GCGGCCAAGG GCGGCAAGCC GCTGACCTTT
GCGAGCCCGG GCAGCGGCTC GCCGATGCAC ATCCTGGGCG AGATGTTCAA CCGCGCCGCG
GGCGTGAGCC TCGGGCACGT GCCCTACAAG GGCGTGGCGC CGGCGGTCAA CGACGTGCTG
GGCGGCCACG TGCCCGCCAC CTTCATCACG CTGGGCCCGG TGGCGCCGTA CCTTGCCAAC
GGCAAGATGC TGCCGCTCGC GGTGGCCTCG CACGAGCGCT CGGCGCTCGC GCCCAAGGTG
CCGACGCTGC AGGAGCTCGG CTACAAGGAC GTGGAGGTCA CGGCCTGGAA CGGCCTCTGG
GGCCCGCGCA ACCTGCCGCC CGAGATCGTC AAGACGCTCA ACGCCCACTT CAACGAGATC
CTGAAGATGC CCGAGATCGT CTCGCGCATG GCCGTGCTGG GCACCACGCC CGTGGGCGGC
AGCGCCGACG TGCTCGGCAA GACCAACGCC GCGGACTTTG CGCGCTTCGG CAAGGTCATC
AAGGAGCTCG GCATCCAGGC CGACTGA
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| Protein sequence | MPSTRRQAIA AALALGVACA TGPARAESSY PSKPITLVVA YPAGGDTDAL ARLFAEKLSA
RVGQPVVVDN RPGASGIIGS AYVSKAQPDG YTLLLSPSTF SIAQLVLKTG GTSGYDVLNG
FTPIVQTGSQ PLFLVAGGAS GLASAKDLVA AAKGGKPLTF ASPGSGSPMH ILGEMFNRAA
GVSLGHVPYK GVAPAVNDVL GGHVPATFIT LGPVAPYLAN GKMLPLAVAS HERSALAPKV
PTLQELGYKD VEVTAWNGLW GPRNLPPEIV KTLNAHFNEI LKMPEIVSRM AVLGTTPVGG
SADVLGKTNA ADFARFGKVI KELGIQAD
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