| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3170 |
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| Symbol | |
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| ID | 7973402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3333393 |
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| End bp | 3334268 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644793754 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002945054 |
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| Protein GI | 239816144 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.702233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG CCACCGCCAC CCACGCGCAG AGCGCCTTGC CCGCTTCCGA GCTGGCGCTG
CTGGAGGCCC GCTTTCCGGC GCGCGCCGTG CCGGTCGGCG GCGGTGCCGT GGTGTCGGTG
CGCGAATGCG GCGCGGGCCC GGCCATCGTC TGCCTGCACG GCATCGGCTC GGGTGCGGCC
TCGTGGCTCG GCCTTGCCTT GCAGCTCGCG CCGCAGGCCC GCGTGATCGC GTGGGATGCG
CCGGGCTATG GCGCATCGAC GCCGCTCGCG CCTGCGGCGC CTTCCGCGGC CGACTACGCG
CAGCGGCTGC ACGGCCTCTT CGATGCGCTC GACATCCAGT CCTGCGTGCT GGTCGGCCAT
TCGCTCGGCG CGATCACGGC GGGCTGCGCG GCGGGCAAGG ATTCTGCCCT GGCTTCGCGC
ATCCGGCGCC TCGTGCTCGT CAGCCCCGCG GCCGGCTATG GCGCCCCGCA GCGCGAGGAA
TCCCGCCGCA AGGTGCGCGC CGAGCGGCTT GCCACGCTCG ACGAACTCGG CATTGCCGGC
ATGGCCGCGA AGCGCGCAGG CCGGCTCGTG TCCGCCGGCG CCAGCGAACG CGCGCGCCAG
TGGGTGCAAT GGAACATGGC GCAGCTGAGC GACGGCGGTT ATCGCCAGGC CGTCGAGCTG
CTGTGCAATG CCGACCTGCT GGCCGACCTG CCGCCCGCCA TGCCGGTGCG CGTGGCCTGC
GGCGCGCTCG ATGCCGTCAC CACGCCAGAG GCCTGCGCCG AAGTCGCGCG CCGCTGCGGC
GTGCCGCTCG AATCGATTGC CGATGCCGGC CATGCGAGCT ACGTGGAGCA GCCGCAGGCC
GTTGCCGCAT TGCTGCGCGA AGTGCTGGCC GCCTGA
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| Protein sequence | MNDATATHAQ SALPASELAL LEARFPARAV PVGGGAVVSV RECGAGPAIV CLHGIGSGAA
SWLGLALQLA PQARVIAWDA PGYGASTPLA PAAPSAADYA QRLHGLFDAL DIQSCVLVGH
SLGAITAGCA AGKDSALASR IRRLVLVSPA AGYGAPQREE SRRKVRAERL ATLDELGIAG
MAAKRAGRLV SAGASERARQ WVQWNMAQLS DGGYRQAVEL LCNADLLADL PPAMPVRVAC
GALDAVTTPE ACAEVARRCG VPLESIADAG HASYVEQPQA VAALLREVLA A
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