Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3160 |
Symbol | |
ID | 7973392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3323181 |
End bp | 3324224 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644793744 |
Product | Rieske (2Fe-2S) domain protein |
Protein accession | YP_002945044 |
Protein GI | 239816134 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCG CCATCACCCC CGTTGCCGCA GACCCGGTCG ACCACCTGCT CGAGATCGGC CTGAAGGATC TCTGGTACCC GATCTGCCCC TCGCACTTCA TCAAGGAGAA CCCCGTCTCG CTGCGCCGCC TGGGCCGCAA GATCGCGCTG TGGCGCGACG GCGAAGGCGT GCTGCACGCG CTGGAAGACC GCTGCCCGCA CCGCGGCGCG CCGCTGTCGC AGGGCGTGGT GCTGGGCGAC CGGCTCTCGT GCCCCTACCA CGGCGTGGAA GTGCGCCATG ACGGCGTCGT CACGCGCGTG CCCGGCAGCC CGGGCTGCAA GCTCGAAGGC TCGCAGGCCA CGCGGCACTT CCATGTGCAG GAACGCGCGG GCGCGGTGTT CCTCTACAAC GGGAAGGAGC CGGTCGACGT GCCGCCGCCG CTCGTGCTGC CCGAGCAGCT CACGGACGAT GCGGAGTATT CGAGCTTCCT TTGCTACACC GAGTGGAAGG GCGACTATCG CTATGTGCTC GACAACGTGA TGGACCCGAT GCACGGCACC TACCTGCACA AGCAGTCGCA TTCGATGGCC GAGGGCGATT CGACGGCCAA GTTCGGCATC CGCCAGACCG ACGCCGGCTT CGTGTTCGAG AAGGAAGGCC AGCGCAACGT CAACTTCGAC TGGACCGAAT GGGCCGACAC CGGCATCCAC TGGATGCGCC TGGAAATTCC ATATCCGAAG ACCGGCGGCC CCGGCGGCAA CTTCATCATC ATCGGCGCCT TCTCGCCGAT CGTGAAGGGC ATGACGGCCA CCTTCTTCTG GCGCGTGCGC AAGCTGCCGC GGGGCTGGGA GCGCGACACC TGGCGCTTCC TCTACAAGAA CCGCCTCGAG GCGCGCCACT GGCACGTGCT CGAGCAGGAC CGCGTGATGC TCGAAGAGAT GGAGCCCGAC GCCAACCAGC ACGAGAACCT CTACCAGCAC GACCTGGGCA TCGTGCGGCT GCGCCGCCAC ATGCGCAATC TCGCGCAAGC ACAGCTCGCA GAAGCTGCCG CGGCCGCGGC CTGA
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Protein sequence | MTIAITPVAA DPVDHLLEIG LKDLWYPICP SHFIKENPVS LRRLGRKIAL WRDGEGVLHA LEDRCPHRGA PLSQGVVLGD RLSCPYHGVE VRHDGVVTRV PGSPGCKLEG SQATRHFHVQ ERAGAVFLYN GKEPVDVPPP LVLPEQLTDD AEYSSFLCYT EWKGDYRYVL DNVMDPMHGT YLHKQSHSMA EGDSTAKFGI RQTDAGFVFE KEGQRNVNFD WTEWADTGIH WMRLEIPYPK TGGPGGNFII IGAFSPIVKG MTATFFWRVR KLPRGWERDT WRFLYKNRLE ARHWHVLEQD RVMLEEMEPD ANQHENLYQH DLGIVRLRRH MRNLAQAQLA EAAAAAA
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