Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3140 |
Symbol | |
ID | 7974350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3299428 |
End bp | 3300660 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644793725 |
Product | Formamidase |
Protein accession | YP_002945025 |
Protein GI | 239816115 |
COG category | [C] Energy production and conversion |
COG ID | [COG2421] Predicted acetamidase/formamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGACA CGCTGATCAA GGTCGACCTG ACCAAGCCGC CCACCGAGAA CGAGATGATC CACAACCGCT GGCATCCGGA CATTCCGATG GCCTGCTGGG TCAACCCGGG CGACGACTTC ATCCTCGAGA CTTTCGACTG GACCGGCGGC TTCATCAAGA ACAACGACAG CGCCGACGAC GTGCGCGACA TCGACCTGAG CACCGTGCAC TACCTCTCGG GCCCCGTGGG CGTGAAGGGC GCCGAGCCCG GCGACCTGCT GGTGGTGGAC CTGCTCGACA TCGGCGCCAA GCAGGACAGC CTCTGGGGCT TCAACGGCTT CTTCTCGAAG AAGAACGGCG GCGGCTTCCT GACCGACCAC TTTCCCGAGG CGCAGAAATC CATCTGGGAC TTCAAGGGCA TGTTCACCAG CTCGCGCCAC GTTCCCGGCG TCAACTTCGC GGGCCTCATC CACCCCGGCC TGATCGGCTG CCTGCCCGAC AAGCCGATGC TCGACATGTG GAACGAGCGC GAAGGCAAGC TCATCGCCAC CGACCCGGAC CGCGTGCCCG GCCTTGCCAA TCCGCCGTTC GCCGGCACCG CCCACATGGG CAAGATGACC GGCGAGGCGC GCGCCAAGGC GGCGGCCGAA GGTGCGCGCA CCGTGCCGCC GCGCGAGCAC GGCGGCAACT GCGACATCAA GGACCTGTCG CGCGGCGCGA AGGTGTTCTT TCCGGTGTAC GTCGACGGCG CGGGCCTCAG CGTGGGCGAC CTGCACTTCA GCCAGGGCGA CGGCGAGATC ACCTTCTGCG GCGCCATCGA GATGGCGGGC TGGGTGCACA TGAAGGTCAC GCTCATCAAG GGCGGCATGG CCAAGTACGG CATCAGGAAC CCGATCTTCA AGCCGAGCGT GATCACGCCG CAGTACAACG ACTACCTGAT CTTCGAAGGC ATCTCGGTCG ACGAGGCCGG CAAGCAGTAC TACCTGGACG TGAACGTGGC CTACCGGCAA GCTTGCCTGA ATGCCATCGA GTACCTGAAG AAGTTCGGCT ACTCGGGCGC GCAGGCCTAT TCGATTTTGG GCACCGCACC CGTGCAGGGC CACATCAGCG GCGTGGTCGA CGTGCCCAAC TCCTGCGCCA CGTTCTGGCT GCCCACGCAG ATCTTCGACT TCGACATCAA CCCGAACGCC GCGGGGCCGG TGAAGATGAT CGACGGCAGC ATCGACATGC CGCTCTCGCA CGACCTGGCC TGA
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Protein sequence | MTDTLIKVDL TKPPTENEMI HNRWHPDIPM ACWVNPGDDF ILETFDWTGG FIKNNDSADD VRDIDLSTVH YLSGPVGVKG AEPGDLLVVD LLDIGAKQDS LWGFNGFFSK KNGGGFLTDH FPEAQKSIWD FKGMFTSSRH VPGVNFAGLI HPGLIGCLPD KPMLDMWNER EGKLIATDPD RVPGLANPPF AGTAHMGKMT GEARAKAAAE GARTVPPREH GGNCDIKDLS RGAKVFFPVY VDGAGLSVGD LHFSQGDGEI TFCGAIEMAG WVHMKVTLIK GGMAKYGIRN PIFKPSVITP QYNDYLIFEG ISVDEAGKQY YLDVNVAYRQ ACLNAIEYLK KFGYSGAQAY SILGTAPVQG HISGVVDVPN SCATFWLPTQ IFDFDINPNA AGPVKMIDGS IDMPLSHDLA
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